RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 PDGFAP04085 211 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 GPC1P35052 558 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 RPL3P39023 403 aaKnown RBP8.92□□□□□ -0.98
PKP4-208ENST00000462335 ETV4P43268 484 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 SLC18A1P54219 525 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 NRG3P56975 720 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 RPL38P63173 70 aaKnown RBP8.92□□□□□ -0.98
PKP4-208ENST00000462335 RPS6KA2Q15349 733 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 PDCD2Q16342 344 aaPredicted RBP8.92□□□□□ -0.98
PKP4-208ENST00000462335 MAPKAPK3Q16644 382 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 TNFAIP8L3Q5GJ75 292 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 SLC6A19Q695T7 634 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 SLC48A1Q6P1K1 146 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 FAM180AQ6UWF9 173 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 R3HCC1LQ7Z5L2 792 aaKnown RBP8.92□□□□□ -0.98
PKP4-208ENST00000462335 GALNT12Q8IXK2 581 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 CCDC116Q8IYX3 515 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 FAM9CQ8IZT9 166 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 TAGAPQ8N103 731 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 LGI4Q8N135 537 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 LRRC25Q8N386 305 aaPredicted RBP8.92□□□□□ -0.98
PKP4-208ENST00000462335 CISD2Q8N5K1 135 aaKnown RBP8.92□□□□□ -0.98
PKP4-208ENST00000462335 RBMXL3Q8N7X1 1067 aaKnown RBP8.92□□□□□ -0.98
PKP4-208ENST00000462335 TMEM178AQ8NBL3 297 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 CATSPER1Q8NEC5 780 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 RAB3IL1Q8TBN0 382 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 SLC22A8Q8TCC7 542 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 CPT1CQ8TCG5 803 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 ELP5Q8TE02 316 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 DOK4Q8TEW6 326 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 PTPMT1Q8WUK0 201 aaPredicted RBP8.92□□□□□ -0.98
PKP4-208ENST00000462335 C19orf60Q96EN9 201 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 FBXL20Q96IG2 436 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 ZNF717Q9BY31 904 aaPredicted RBP8.92□□□□□ -0.98
PKP4-208ENST00000462335 ZBTB20Q9HC78 741 aaPredicted RBP8.92□□□□□ -0.98
PKP4-208ENST00000462335 TIMMDC1Q9NPL8 285 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 SLC35C2Q9NQQ7 365 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 KLHL1Q9NR64 748 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 THAP1Q9NVV9 213 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 HPF1Q9NWY4 346 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 ANKRD10Q9NXR5 420 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 SH3BP4Q9P0V3 963 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 LRFN1Q9P244 771 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 ZDHHC2Q9UIJ5 367 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 DNAJC15Q9Y5T4 150 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 CHD6Q8TD26 2715 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 IGSF10Q6WRI0 2623 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 CNTRLQ7Z7A1 2325 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 LOC400499M0QZD8 3231 aa8.92□□□□□ -0.98
PKP4-208ENST00000462335 UQCRHLA0A096LP55 91 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 ATP6AP2A0A1C7CYW4 349 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 OR6C76A6NM76 312 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 TRPC5OSA6NMA1 111 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 WASHC1A8K0Z3 465 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 TMEM233B4DJY2 109 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 J3QKU1 62 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 ITGA10O75578 1167 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 ATP6AP2O75787 350 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 BCAS2O75934 225 aaPredicted RBP8.91□□□□□ -0.98
PKP4-208ENST00000462335 LRATO95237 230 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 RASAL1O95294 804 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 CRYABP02511 175 aaKnown RBP8.91□□□□□ -0.98
PKP4-208ENST00000462335 KITP10721 976 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 H2AFXP16104 143 aaPredicted RBP8.91□□□□□ -0.98
PKP4-208ENST00000462335 DDCP20711 480 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 GALNSP34059 522 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 CD96P40200 585 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 TNFSF10P50591 281 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 NCBP2P52298 156 aaKnown RBP eCLIP8.91□□□□□ -0.98
PKP4-208ENST00000462335 EFNA3P52797 238 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 MLLT10P55197 1068 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 MLF1P58340 268 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 RNF4P78317 190 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 TLE1Q04724 770 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 OR1C1Q15619 314 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 ZNF766Q5HY98 468 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 NXNQ6DKJ4 435 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 H3F3CQ6NXT2 135 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 GALNT18Q6P9A2 607 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 OPN5Q6U736 354 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 IL20RBQ6UXL0 311 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 Q6ZS92 163 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 IKBIPQ70UQ0 350 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 TICAM1Q8IUC6 712 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 VWA5B2Q8N398 1253 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 NFAM1Q8NET5 270 aaPredicted RBP8.91□□□□□ -0.98
PKP4-208ENST00000462335 OR7G1Q8NGA0 311 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 ZFP28Q8NHY6 868 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 PSMF1Q92530 271 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 GFM2Q969S9 779 aaKnown RBP8.91□□□□□ -0.98
PKP4-208ENST00000462335 ARL8AQ96BM9 186 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 PPCDCQ96CD2 204 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 TLCD1Q96CP7 247 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 TSSK3Q96PN8 268 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 RNF32Q9H0A6 362 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 MYNNQ9NPC7 610 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 INTS9Q9NV88 658 aaKnown RBP8.91□□□□□ -0.98
PKP4-208ENST00000462335 ATAD3AQ9NVI7 634 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 EHD3Q9NZN3 535 aa8.91□□□□□ -0.98
PKP4-208ENST00000462335 MYOTQ9UBF9 498 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms