RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CNIH4Q9P003 139 aa8.22□□□□□ -1.09
LDB1-203ENST00000461873 XPR1Q9UBH6 696 aa8.22□□□□□ -1.09
LDB1-203ENST00000461873 ZNF180Q9UJW8 692 aa8.22□□□□□ -1.09
LDB1-203ENST00000461873 SLC12A4Q9UP95 1085 aa8.22□□□□□ -1.09
LDB1-203ENST00000461873 ERVK-19Q9WJR5 959 aa8.22□□□□□ -1.09
LDB1-203ENST00000461873 RNF11Q9Y3C5 154 aa8.22□□□□□ -1.09
LDB1-203ENST00000461873 ASB1Q9Y576 335 aa8.22□□□□□ -1.09
LDB1-203ENST00000461873 ZNF780BQ9Y6R6 833 aa8.22□□□□□ -1.09
LDB1-203ENST00000461873 OR14I1A6ND48 311 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 GLOD5A6NK44 160 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 FOXO6A8MYZ6 492 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 G3V3Y1 287 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 TGFBR3LH3BV60 316 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 PROM1O43490 865 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 KLK8O60259 260 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 PRKNO60260 465 aaPredicted RBP8.21□□□□□ -1.1
LDB1-203ENST00000461873 PRAMEF4O60810 478 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 ERAL1O75616 437 aaKnown RBP8.21□□□□□ -1.1
LDB1-203ENST00000461873 SUPT7LO94864 414 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 SEMA3DO95025 777 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 ETHE1O95571 254 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 KRT6AP02538 564 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 KRT6BP04259 564 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 FAM153BP0C7A2 387 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 SLC35E2P0CK97 266 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 MTHFD2P13995 350 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 EPORP19235 508 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 HMOX2P30519 316 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 KRT6CP48668 564 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 MASP1P48740 699 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 ALDH9A1P49189 494 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 NEK2P51955 445 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 E2F2Q14209 437 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 SF3B4Q15427 424 aaKnown RBP eCLIP8.21□□□□□ -1.11e-10■■□□□ 12.6
LDB1-203ENST00000461873 FAM153CQ494X1 144 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 PIGGQ5H8A4 983 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 TBCELQ5QJ74 424 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 PRAMEF9Q5VWM5 478 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 TRMT10CQ7L0Y3 403 aaKnown RBP8.21□□□□□ -1.1
LDB1-203ENST00000461873 UBE3DQ7Z6J8 389 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 PACS2Q86VP3 889 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 LCA5Q86VQ0 697 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 SLC22A9Q8IVM8 553 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 SIAH3Q8IW03 269 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 GALNT12Q8IXK2 581 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 RNF175Q8N4F7 328 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 CCDC63Q8NA47 563 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 OR52N2Q8NGI0 321 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 ZNF721Q8TF20 911 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 ANKRD9Q96BM1 317 aaPredicted RBP8.21□□□□□ -1.1
LDB1-203ENST00000461873 SMC6Q96SB8 1091 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 DOHHQ9BU89 302 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 NTMT1Q9BV86 223 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 TTTY12Q9BZ98 90 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 BRINP2Q9C0B6 783 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 DDX31Q9H8H2 851 aaKnown RBP8.21□□□□□ -1.1
LDB1-203ENST00000461873 SLC24A3Q9HC58 644 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 KCNJ16Q9NPI9 418 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 GIMAP4Q9NUV9 329 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 SENP1Q9P0U3 644 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 BCAP29Q9UHQ4 241 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 ZNF223Q9UK11 482 aaPredicted RBP8.21□□□□□ -1.1
LDB1-203ENST00000461873 ADAM29Q9UKF5 820 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 ATG4BQ9Y4P1 393 aa8.21□□□□□ -1.1
LDB1-203ENST00000461873 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.21□□□□□ -1.1
LDB1-203ENST00000461873 UTP20O75691 2785 aaKnown RBP8.2□□□□□ -1.1
LDB1-203ENST00000461873 TRGV5A0A0B4J1U4 118 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 C1orf226A1L170 272 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 CDH16O75309 829 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 TRAPPC6AO75865 159 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 TBX6O95947 436 aaPredicted RBP8.2□□□□□ -1.1
LDB1-203ENST00000461873 C1QAP02745 245 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 GBAP04062 536 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 GSTA1P08263 222 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 GABRA1P14867 456 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 PORP16435 677 aaPredicted RBP8.2□□□□□ -1.1
LDB1-203ENST00000461873 TNFRSF8P28908 595 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 SSTR2P30874 369 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 CHRNB4P30926 498 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 GALNSP34059 522 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 KRT20P35900 424 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 DNASE1L1P49184 302 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 XKP51811 444 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 NR0B1P51843 470 aaKnown RBP8.2□□□□□ -1.1
LDB1-203ENST00000461873 HNRNPH2P55795 449 aaKnown RBP8.2□□□□□ -1.1
LDB1-203ENST00000461873 RASA2Q15283 850 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 SPRED3Q2MJR0 410 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 CMPK2Q5EBM0 449 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 LCE2DQ5TA82 110 aaPredicted RBP8.2□□□□□ -1.1
LDB1-203ENST00000461873 ZNF321PQ8N8H1 164 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 OR4F6Q8NGB9 312 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 DIO2Q92813 273 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 SPACA9Q96E40 222 aaPredicted RBP8.2□□□□□ -1.1
LDB1-203ENST00000461873 CCDC126Q96EE4 140 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 BRF2Q9HAW0 419 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 PCTPQ9UKL6 214 aa8.2□□□□□ -1.1
LDB1-203ENST00000461873 DOPEY1Q5JWR5 2465 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 A0A0A6YYD5 115 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 GNG14A0A1W2PPG7 69 aa8.19□□□□□ -1.1
LDB1-203ENST00000461873 A0A1W2PR48 441 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms