RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 PLEKHF2Q9H8W4 249 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 PTBP2Q9UKA9 531 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 RAI1Q7Z5J4 1906 aaPredicted RBP13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 KIAA1549Q9HCM3 1950 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 ARID1AO14497 2285 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 ATRQ13535 2644 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 TP53I11O14683 189 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 TAPBPO15533 448 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 HEXAP06865 529 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 ALOX15P16050 662 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 TNNI3P19429 210 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 OPRM1P35372 400 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 BUD31P41223 144 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 RPL21P46778 160 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 CDK9P50750 372 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 ZNF136P52737 540 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 ARL4CP56559 192 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 SLC37A1P57057 533 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 DCAF7P61962 342 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 RPP38P78345 283 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 DUSP8Q13202 625 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 ZNF460Q14592 562 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 AP5B1Q2VPB7 878 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 VASNQ6EMK4 673 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 SCIMPQ6UWF3 145 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 RNF111Q6ZNA4 994 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 KRTAP1-3Q8IUG1 177 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 LRRC8AQ8IWT6 810 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 LRRC75A-AS1Q8N1F1 130 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 OR10G3Q8NGC4 313 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 CFAP36Q96G28 342 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 RBM18Q96H35 190 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 TMEM41AQ96HV5 264 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 UBXN10Q96LJ8 280 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 DACH2Q96NX9 599 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 F2RL3Q96RI0 385 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 ACBD3Q9H3P7 528 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 CALHM2Q9HA72 323 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 SNX15Q9NRS6 342 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 SNX12Q9UMY4 172 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 C15orf41Q9Y2V0 281 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 HIVEP2P31629 2446 aa13.35□□□□□ -0.27
DNMT3A-207ENST00000461228 STAB1Q9NY15 2570 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 CLCA1A8K7I4 914 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 UGDHO60701 494 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 SEC31AO94979 1220 aaKnown RBP13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 RHOXF2BP0C7M4 288 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 CD1DP15813 335 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 CPN2P22792 545 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 GDF1P27539 372 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 TLX1P31314 330 aaPredicted RBP13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 MSH2P43246 934 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 SLC12A2P55011 1212 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 EEF1A1P68104 462 aaKnown RBP13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 IRF8Q02556 426 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 KEAP1Q14145 624 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 PRAMEF20Q5VT98 475 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 EEF1A1P5Q5VTE0 462 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 GRHL2Q6ISB3 625 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 MED27Q6P2C8 311 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 CYS1Q717R9 158 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 GPSM1Q86YR5 675 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 TNIP2Q8NFZ5 429 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 ISL2Q96A47 359 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 UCN2Q96RP3 112 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 GPR22Q99680 433 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 TIMP4Q99727 224 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 PIP5K1AQ99755 562 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 SFXN3Q9BWM7 321 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 LYARQ9NX58 379 aaKnown RBP13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 NUDT4Q9NZJ9 180 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 MED12LQ86YW9 2145 aa13.34□□□□□ -0.27
DNMT3A-207ENST00000461228 COL6A5A8TX70 2615 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 C15orf38-AP3S2A0A0A6YYH1 394 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 TP73O15350 636 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 CLPSP04118 112 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 HRGP04196 525 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 INHBBP09529 407 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 CTSSP25774 331 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 HSPA7P48741 367 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 LTBQ06643 244 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 CHIT1Q13231 466 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 C18orf21Q32NC0 220 aaPredicted RBP13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 DEPDC1Q5TB30 811 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 MRM1Q6IN84 353 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 METTL2BQ6P1Q9 378 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 CCDC91Q7Z6B0 441 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 ADGRE4PQ86SQ3 457 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 GPR180Q86V85 440 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 FAM13CQ8NE31 585 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 WFDC11Q8NEX6 87 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 OR7G3Q8NG95 312 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 ZPLD1Q8TCW7 415 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 ARSGQ96EG1 525 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 DTNBP1Q96EV8 351 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 COX4I2Q96KJ9 171 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 KRT12Q99456 494 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 ZNF717Q9BY31 904 aaPredicted RBP13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 ANGPTL4Q9BY76 406 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 CD244Q9BZW8 370 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms