RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 PPP1CAP62136 330 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 SNRPNP63162 240 aaKnown RBP7.58□□□□□ -1.2
SFPQ-202ENST00000460428 SKP1P63208 163 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 PRR5P85299 388 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 MYBPC1Q00872 1141 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 BNC1Q01954 994 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 KCNC4Q03721 635 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 HSPB3Q12988 150 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 IL18R1Q13478 541 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 SPIDRQ14159 915 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 DEFB134Q4QY38 66 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 TCTE1Q5JU00 501 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 TTC23Q5W5X9 447 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 PMS2CLQ68D20 193 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 KDM4DQ6B0I6 523 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 HEPHL1Q6MZM0 1159 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 FAM180BQ6P0A1 224 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 TMEM154Q6P9G4 183 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 ZCCHC12Q6PEW1 402 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 VTCN1Q7Z7D3 282 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 TMEM179BQ7Z7N9 219 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 ZNF605Q86T29 641 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 STK32CQ86UX6 486 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 ZNF761Q86XN6 746 aaPredicted RBP7.58□□□□□ -1.2
SFPQ-202ENST00000460428 TMEFF1Q8IYR6 380 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 LGI4Q8N135 537 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 CA13Q8N1Q1 262 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 ARL10Q8N8L6 244 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 OR4K14Q8NGD5 310 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 OR5AK3PQ8NH89 298 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 ZNF675Q8TD23 568 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 MAGEE2Q8TD90 523 aaPredicted RBP7.58□□□□□ -1.2
SFPQ-202ENST00000460428 ADAMTS16Q8TE57 1224 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 ADAMTS18Q8TE60 1221 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 GEMIN6Q8WXD5 167 aaKnown RBP7.58□□□□□ -1.2
SFPQ-202ENST00000460428 N4BP2L2Q92802 583 aaPredicted RBP7.58□□□□□ -1.2
SFPQ-202ENST00000460428 HOXB13Q92826 284 aaPredicted RBP7.58□□□□□ -1.2
SFPQ-202ENST00000460428 SDCCAG3Q96C92 435 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 ZC3H10Q96K80 434 aaKnown RBP7.58□□□□□ -1.2
SFPQ-202ENST00000460428 SLC35G5Q96KT7 338 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 ZNF300Q96RE9 604 aaPredicted RBP7.58□□□□□ -1.2
SFPQ-202ENST00000460428 BTBD2Q9BX70 525 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 MIR1-1HGQ9H1L0 117 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 C3orf14Q9HBI5 128 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 PNPLA3Q9NST1 481 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 ZCCHC3Q9NUD5 404 aaKnown RBP7.58□□□□□ -1.2
SFPQ-202ENST00000460428 GIN1Q9NXP7 522 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 NDUFAF4Q9P032 175 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 PTGFRNQ9P2B2 879 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 P2RX2Q9UBL9 471 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 SUSD2Q9UGT4 822 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 TMEFF2Q9UIK5 374 aaPredicted RBP7.58□□□□□ -1.2
SFPQ-202ENST00000460428 C3orf18Q9UK00 162 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 PILRBQ9UKJ0 227 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 BAG5Q9UL15 447 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 ABCG2Q9UNQ0 655 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 PLCL2Q9UPR0 1127 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 LIPT1Q9Y234 373 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 SNX8Q9Y5X2 465 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 GPC6Q9Y625 555 aaPredicted RBP7.58□□□□□ -1.2
SFPQ-202ENST00000460428 AK5Q9Y6K8 562 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 SPACA6W5XKT8 324 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 CACNA1IQ9P0X4 2223 aa7.58□□□□□ -1.2
SFPQ-202ENST00000460428 IGHV1OR21-1A0A087WYE8 117 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 A0A0G2JPF8 293 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 ARRDC5A6NEK1 342 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 PRAMEF25A6NGN4 478 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 GLOD5A6NK44 160 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 HNRNPCL2B2RXH8 293 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 HNRNPCL3B7ZW38 293 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 H0YIG0 161 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 H3BMH7 237 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 H3BNH8 94 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 STK25O00506 426 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 GNGT2O14610 69 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 ADAMDEC1O15204 470 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 TOX3O15405 576 aaPredicted RBP7.57□□□□□ -1.2
SFPQ-202ENST00000460428 HCRTR1O43613 425 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 PLOD3O60568 738 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 DNAJB6O75190 326 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 PRKRAO75569 313 aaKnown RBP7.57□□□□□ -1.2
SFPQ-202ENST00000460428 ERAL1O75616 437 aaKnown RBP7.57□□□□□ -1.2
SFPQ-202ENST00000460428 DNAJB5O75953 348 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 NSA2O95478 260 aaKnown RBP7.57□□□□□ -1.2
SFPQ-202ENST00000460428 H6PDO95479 791 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 ZBTB11O95625 1053 aaPredicted RBP7.57□□□□□ -1.2
SFPQ-202ENST00000460428 GPR75O95800 540 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 AGR2O95994 175 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 HMGN2P05204 90 aaKnown RBP7.57□□□□□ -1.2
SFPQ-202ENST00000460428 HNRNPCL4P0DMR1 293 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 ITGAMP11215 1152 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 CPMP14384 443 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 GNSP15586 552 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 PORP16435 677 aaPredicted RBP7.57□□□□□ -1.2
SFPQ-202ENST00000460428 RHCEP18577 417 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 GALNSP34059 522 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 GPC1P35052 558 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 HOXD12P35452 270 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 MAP3K8P41279 467 aa7.57□□□□□ -1.2
SFPQ-202ENST00000460428 XCR1P46094 333 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms