RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 GORASP2Q9H8Y8 452 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 IL21RQ9HBE5 538 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 SLC35C2Q9NQQ7 365 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 IRAK4Q9NWZ3 460 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 TEX10Q9NXF1 929 aaPredicted RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 EGFL7Q9UHF1 273 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 ANAPC2Q9UJX6 822 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 FBXW2Q9UKT8 454 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 EXO1Q9UQ84 846 aaKnown RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 MRPS33Q9Y291 106 aaKnown RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 ASB4Q9Y574 426 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 AP4S1Q9Y587 144 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 ARID1BQ8NFD5 2236 aaPredicted RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 ATMQ13315 3056 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 LOC105369274A0A096LPK9 316 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 LOC102723532A0A0G2JNH3 316 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 RNF103-CHMP3A0A140T963 221 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 CXCR6O00574 342 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 P2RX6O15547 441 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 HNRNPRO43390 633 aaKnown RBP8.44□□□□□ -1.06
VPS50-207ENST00000458530 PROM1O43490 865 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 PCDHGA12O60330 932 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 AIFM1O95831 613 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 C9P02748 559 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 STATHP02808 62 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 SMIM10L1P0DMW3 83 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 CSNK2A2P19784 350 aaPredicted RBP8.44□□□□□ -1.06
VPS50-207ENST00000458530 ATP6V1B2P21281 511 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 MPIP34949 423 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 MSX2P35548 267 aaPredicted RBP8.44□□□□□ -1.06
VPS50-207ENST00000458530 GCKP35557 465 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 AVPR1BP47901 424 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 MAPK10P53779 464 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 SESN3P58005 492 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 HBA1P69905 142 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 HSD11B2P80365 405 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 RBBP4Q09028 425 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 VEZF1Q14119 521 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 FAM53BQ14153 422 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 SELPLGQ14242 412 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 GRM7Q14831 915 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 SHBQ15464 509 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 MUM1Q2TAK8 710 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 GTDC1Q4AE62 458 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 DEFB134Q4QY38 66 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 FAM98BQ52LJ0 330 aaKnown RBP8.44□□□□□ -1.06
VPS50-207ENST00000458530 GCNT6Q5T4J0 391 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 YOD1Q5VVQ6 348 aaPredicted RBP8.44□□□□□ -1.06
VPS50-207ENST00000458530 FRMPD2BQ6IN97 320 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 SLC48A1Q6P1K1 146 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 CYP2R1Q6VVX0 501 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 TMEM64Q6YI46 380 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 LRRC74BQ6ZQY2 392 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 KANSL1Q7Z3B3 1105 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 SPRED1Q7Z699 444 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 CALHM3Q86XJ0 350 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 OR4N4Q8N0Y3 316 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 PQLC1Q8N2U9 271 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 DNAJC22Q8N4W6 341 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 C11orf65Q8NCR3 313 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 OR52N2Q8NGI0 321 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 ZFP90Q8TF47 636 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 CCDC74AQ96AQ1 378 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 CIDECQ96AQ7 238 aaPredicted RBP8.44□□□□□ -1.06
VPS50-207ENST00000458530 SMIM10Q96HG1 83 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 ZNF583Q96ND8 569 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 FCRL4Q96PJ5 515 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 CDC6Q99741 560 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 DPH2Q9BQC3 489 aaPredicted RBP8.44□□□□□ -1.06
VPS50-207ENST00000458530 AICDAQ9GZX7 198 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 C3orf14Q9HBI5 128 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 ARMC1Q9NVT9 282 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 RPS6KA6Q9UK32 745 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 DAPP1Q9UN19 280 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 SAMD4AQ9UPU9 718 aaKnown RBP8.44□□□□□ -1.06
VPS50-207ENST00000458530 CLCA2Q9UQC9 943 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 BTBD3Q9Y2F9 522 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 COL5A1P20908 1838 aaPredicted RBP8.44□□□□□ -1.06
VPS50-207ENST00000458530 NUP210LQ5VU65 1888 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 RP1P56715 2156 aa8.44□□□□□ -1.06
VPS50-207ENST00000458530 A0A1W2PR48 441 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 FLRT2O43155 660 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 GALR3O60755 368 aaPredicted RBP8.43□□□□□ -1.06
VPS50-207ENST00000458530 ERAL1O75616 437 aaKnown RBP8.43□□□□□ -1.06
VPS50-207ENST00000458530 KLHL18O94889 574 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 IFNA14P01570 189 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 IFI6P09912 130 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 MSL3P1P0C860 447 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 IL1RNP18510 177 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 ITPKBP27987 946 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 PCGF2P35227 344 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 EIF2S3P41091 472 aaKnown RBP8.43□□□□□ -1.06
VPS50-207ENST00000458530 PTDSS1P48651 473 aaKnown RBP8.43□□□□□ -1.06
VPS50-207ENST00000458530 PRIM2P49643 509 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 NCBP2P52298 156 aaKnown RBP eCLIP8.43□□□□□ -1.062e-7■■■■□ 26.1
VPS50-207ENST00000458530 LIM2P55344 173 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 GFERP55789 205 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 PCBP4P57723 403 aaKnown RBP8.43□□□□□ -1.06
VPS50-207ENST00000458530 RAB38P57729 211 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 OR1D5P58170 312 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms