RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 FAIM2Q9BWQ8 316 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 BRINP2Q9C0B6 783 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 TNFRSF12AQ9NP84 129 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 SH3BGRL2Q9UJC5 107 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 PPIEQ9UNP9 301 aaKnown RBP17.35■□□□□ 0.37
USP39-209ENST00000458268 C1orf226A1L170 272 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 G3V3Y1 287 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 TRIM13O60858 407 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 SEMA7AO75326 666 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 OR6B1O95007 311 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 UNC5CO95185 931 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 IL3P08700 152 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 EDN3P14138 238 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 ALDH6A1Q02252 535 aaKnown RBP17.34■□□□□ 0.37
USP39-209ENST00000458268 SLC29A4Q7RTT9 530 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 GALNT12Q8IXK2 581 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 C9orf40Q8IXQ3 194 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 CPSF7Q8N684 471 aaKnown RBP17.34■□□□□ 0.37
USP39-209ENST00000458268 OR5L2Q8NGL0 311 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 CHTF18Q8WVB6 975 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 TM4SF18Q96CE8 201 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 SCMH1Q96GD3 660 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 FBXL20Q96IG2 436 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 RASL10BQ96S79 203 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 MKS1Q9NXB0 559 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 MYOTQ9UBF9 498 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 MCM8Q9UJA3 840 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 RAB21Q9UL25 225 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 DLGAP4Q9Y2H0 992 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 DOPEY2Q9Y3R5 2298 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 POLR3HQ9Y535 204 aaPredicted RBP17.34■□□□□ 0.37
USP39-209ENST00000458268 PCDHA9Q9Y5H5 950 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 PTGDR2Q9Y5Y4 395 aa17.34■□□□□ 0.37
USP39-209ENST00000458268 EML6Q6ZMW3 1958 aa17.33■□□□□ 0.37
USP39-209ENST00000458268 GOLGA6L10A6NI86 522 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 TMEM200CA6NKL6 621 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 NME2P1O60361 137 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 SLC35E2P0CK97 266 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 CPMP14384 443 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 NME2P22392 152 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 MST1P26927 711 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 SSTR4P31391 388 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 TIA1P31483 386 aaKnown RBP eCLIP17.33■□□□□ 0.36
USP39-209ENST00000458268 MEOX1P50221 254 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 NAA20P61599 178 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 SRSF1Q07955 248 aaKnown RBP eCLIP17.33■□□□□ 0.363e-6■■■■■ 29.6
USP39-209ENST00000458268 BIKQ13323 160 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 SPIN4Q56A73 249 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 SLC48A1Q6P1K1 146 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 MDGA2Q7Z553 956 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 C7orf57Q8NEG2 295 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 PPP1R14CQ8TAE6 165 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 EXOSC8Q96B26 276 aaKnown RBP17.33■□□□□ 0.36
USP39-209ENST00000458268 SLX1AQ9BQ83 275 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.33■□□□□ 0.36
USP39-209ENST00000458268 SEC14L3Q9UDX4 400 aa17.33■□□□□ 0.36
USP39-209ENST00000458268 WDR91A4D1P6 747 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 NPIPA5E9PKD4 350 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 CHRNGP07510 517 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 ANXA4P09525 319 aaPredicted RBP17.32■□□□□ 0.36
USP39-209ENST00000458268 CT62P0C5K7 136 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 UROSP10746 265 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 PORP16435 677 aaPredicted RBP17.32■□□□□ 0.36
USP39-209ENST00000458268 TRHRP34981 398 aaPredicted RBP17.32■□□□□ 0.36
USP39-209ENST00000458268 RAE1P78406 368 aaKnown RBP17.32■□□□□ 0.36
USP39-209ENST00000458268 HLA-DQA1Q5Y7H0 255 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 ZNF227Q86WZ6 799 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 ADCY4Q8NFM4 1077 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 DNAJB8Q8NHS0 232 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 PKNOX2Q96KN3 472 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 ZIM3Q96PE6 472 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 TIMMDC1Q9NPL8 285 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 RRAGDQ9NQL2 400 aaPredicted RBP17.32■□□□□ 0.36
USP39-209ENST00000458268 HEY2Q9UBP5 337 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 BCAP29Q9UHQ4 241 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 UTS2RQ9UKP6 389 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 NPIPA1Q9UND3 350 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 KLF13Q9Y2Y9 288 aaPredicted RBP17.32■□□□□ 0.36
USP39-209ENST00000458268 ZNF780BQ9Y6R6 833 aa17.32■□□□□ 0.36
USP39-209ENST00000458268 TMEM233B4DJY2 109 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 AZIN1O14977 448 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 CHEK2O96017 543 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 ZNF24P17028 368 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 SPRED3Q2MJR0 410 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 SULF2Q8IWU5 870 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 DDIASQ8IXT1 998 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 OR5M3Q8NGP4 307 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 SLC22A8Q8TCC7 542 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 C16orf78Q8WTQ4 265 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 FRMD6Q96NE9 622 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 BARD1Q99728 777 aaKnown RBP17.31■□□□□ 0.36
USP39-209ENST00000458268 CXorf21Q9HAI6 301 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 KCNK9Q9NPC2 374 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 PSME2Q9UL46 239 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 FLNCQ14315 2725 aa17.31■□□□□ 0.36
USP39-209ENST00000458268 H3BQF6 201 aa17.3■□□□□ 0.36
USP39-209ENST00000458268 TFECO14948 347 aaPredicted RBP17.3■□□□□ 0.36
USP39-209ENST00000458268 ZNHIT1O43257 154 aa17.3■□□□□ 0.36
USP39-209ENST00000458268 CTIFO43310 598 aaKnown RBP17.3■□□□□ 0.36
USP39-209ENST00000458268 PEX1O43933 1283 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms