RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 PUM1Q14671 1186 aaKnown RBP eCLIP15.42■□□□□ 0.06
CAPN13-203ENST00000458085 LASP1Q14847 261 aaKnown RBP15.42■□□□□ 0.06
CAPN13-203ENST00000458085 CEBPEQ15744 281 aa15.42■□□□□ 0.06
CAPN13-203ENST00000458085 CAMKVQ8NCB2 501 aa15.42■□□□□ 0.06
CAPN13-203ENST00000458085 OR52J3Q8NH60 311 aa15.42■□□□□ 0.06
CAPN13-203ENST00000458085 KAT2AQ92830 837 aa15.42■□□□□ 0.06
CAPN13-203ENST00000458085 SHDQ96IW2 340 aa15.42■□□□□ 0.06
CAPN13-203ENST00000458085 ZNF300Q96RE9 604 aaPredicted RBP15.42■□□□□ 0.06
CAPN13-203ENST00000458085 SPEGQ15772 3267 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 LOC100130705A0A1B0GUX0 176 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 MFN2O95140 757 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 HMGN2P05204 90 aaKnown RBP15.41■□□□□ 0.06
CAPN13-203ENST00000458085 DCNP07585 359 aaKnown RBP15.41■□□□□ 0.06
CAPN13-203ENST00000458085 IL7RP16871 459 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 CD247P20963 164 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 CPN2P22792 545 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 EPHA2P29317 976 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 ARHGDIAP52565 204 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 RACK1P63244 317 aaKnown RBP15.41■□□□□ 0.06
CAPN13-203ENST00000458085 ZP2Q05996 745 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 FUT5Q11128 374 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 CTU2Q2VPK5 515 aaKnown RBP15.41■□□□□ 0.06
CAPN13-203ENST00000458085 TTC23Q5W5X9 447 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 ARL14Q8N4G2 192 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 SPEM1Q8N4L4 309 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 ZNF555Q8NEP9 628 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 OR5T3Q8NGG3 340 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 RERGQ96A58 199 aaPredicted RBP15.41■□□□□ 0.06
CAPN13-203ENST00000458085 TMIGD2Q96BF3 282 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 SERINC2Q96SA4 455 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 EPYCQ99645 322 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 WFDC6Q9BQY6 131 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 POMT2Q9UKY4 750 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 DAPP1Q9UN19 280 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 KCNE3Q9Y6H6 103 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 PCDH15Q96QU1 1955 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 SLC28A2O43868 658 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 KIF1CO43896 1103 aaKnown RBP15.41■□□□□ 0.06
CAPN13-203ENST00000458085 DPM1O60762 260 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 ALOX12P18054 663 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 VSX2P58304 361 aaPredicted RBP15.41■□□□□ 0.06
CAPN13-203ENST00000458085 EPS8Q12929 822 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.41■□□□□ 0.06
CAPN13-203ENST00000458085 TMEM64Q6YI46 380 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 THAP5Q7Z6K1 395 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 HMGN2P46Q86SG4 172 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 ARMC8Q8IUR7 673 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 SLC30A8Q8IWU4 369 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 C8orf59Q8N0T1 100 aaPredicted RBP15.41■□□□□ 0.06
CAPN13-203ENST00000458085 SIMC1Q8NDZ2 872 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 PIK3C3Q8NEB9 887 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 CADM4Q8NFZ8 388 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 C1orf216Q8TAB5 229 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 FAM174AQ8TBP5 190 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 APOBEC4Q8WW27 367 aaKnown RBP15.41■□□□□ 0.06
CAPN13-203ENST00000458085 GEMIN6Q8WXD5 167 aaKnown RBP15.41■□□□□ 0.06
CAPN13-203ENST00000458085 THAP11Q96EK4 314 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 NRBF2Q96F24 287 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 TREX2Q9BQ50 279 aaPredicted RBP15.41■□□□□ 0.06
CAPN13-203ENST00000458085 IL21RQ9HBE5 538 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 THSD1Q9NS62 852 aa15.41■□□□□ 0.06
CAPN13-203ENST00000458085 TNFRSF11BO00300 401 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 B3GALT2O43825 422 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 SDC3O75056 442 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 IFNA14P01570 189 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 RAD23AP54725 363 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 NR1H2P55055 460 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 CDH12P55289 794 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 SPIBQ01892 262 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 DMWDQ09019 674 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 FOXD4Q12950 439 aaPredicted RBP15.4■□□□□ 0.06
CAPN13-203ENST00000458085 SIM2Q14190 667 aaPredicted RBP15.4■□□□□ 0.06
CAPN13-203ENST00000458085 MEP1AQ16819 746 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 LAIR2Q6ISS4 152 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 COMTD1Q86VU5 262 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 OR4C15Q8NGM1 316 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 DOK4Q8TEW6 326 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 ELP4Q96EB1 424 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 MYCBPQ99417 103 aaPredicted RBP15.4■□□□□ 0.06
CAPN13-203ENST00000458085 RIBC2Q9H4K1 309 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 EQTNQ9NQ60 294 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 SEMA3GQ9NS98 782 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 ZSCAN32Q9NX65 697 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 PCDHGB3Q9Y5G1 929 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 ZNF780BQ9Y6R6 833 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 CACNA1IQ9P0X4 2223 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 MPIP34949 423 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 BUD31P41223 144 aaPredicted RBP15.4■□□□□ 0.06
CAPN13-203ENST00000458085 XCR1P46094 333 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 CLK3P49761 638 aaKnown RBP15.4■□□□□ 0.06
CAPN13-203ENST00000458085 ID2Q02363 134 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 RELAQ04206 551 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 CD47Q08722 323 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 GANABQ14697 944 aaKnown RBP15.4■□□□□ 0.06
CAPN13-203ENST00000458085 ELOCQ15369 112 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 CNPY1Q3B7I2 92 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 ZC3H12BQ5HYM0 836 aaKnown RBP15.4■□□□□ 0.06
CAPN13-203ENST00000458085 FAHD1Q6P587 224 aa15.4■□□□□ 0.06
CAPN13-203ENST00000458085 RBM44Q6ZP01 1051 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms