RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 LARP4Q71RC2 724 aaKnown RBP eCLIP16.96■□□□□ 0.31
TRIM13-206ENST00000457662 TICAM1Q8IUC6 712 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 LIX1Q8N485 282 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 SIRT6Q8N6T7 355 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 OR1N1Q8NGS0 311 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 SLC2A12Q8TD20 617 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 SLC39A7Q92504 469 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 TM9SF4Q92544 642 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 NCLNQ969V3 563 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 EXOSC8Q96B26 276 aaKnown RBP16.96■□□□□ 0.31
TRIM13-206ENST00000457662 CNRIP1Q96F85 164 aaPredicted RBP16.96■□□□□ 0.31
TRIM13-206ENST00000457662 ZNF354BQ96LW1 612 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 C1orf50Q9BV19 199 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 DEFB126Q9BYW3 111 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 SEMA4CQ9C0C4 833 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 OR8D2Q9GZM6 311 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 REEP4Q9H6H4 257 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 ZNF71Q9NQZ8 489 aaPredicted RBP16.96■□□□□ 0.31
TRIM13-206ENST00000457662 ASIC5Q9NY37 505 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 NOP53Q9NZM5 478 aaKnown RBP16.96■□□□□ 0.31
TRIM13-206ENST00000457662 COPS7AQ9UBW8 275 aa16.96■□□□□ 0.31
TRIM13-206ENST00000457662 EXO1Q9UQ84 846 aaKnown RBP16.96■□□□□ 0.31
TRIM13-206ENST00000457662 A0A1W2PS29 197 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 SDHDO14521 159 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 ATP1B1P05026 303 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 PCSK2P16519 638 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 MPIP34949 423 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 ZNF750Q32MQ0 723 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 ABHD17BQ5VST6 288 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 IGFL3Q6UXB1 125 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 DGAT2L6Q6ZPD8 337 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 LRRC25Q8N386 305 aaPredicted RBP16.95■□□□□ 0.3
TRIM13-206ENST00000457662 SLC5A8Q8N695 610 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 MTERF3Q96E29 417 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 ZNF764Q96H86 408 aaPredicted RBP16.95■□□□□ 0.3
TRIM13-206ENST00000457662 FBXL20Q96IG2 436 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 EPS8L2Q9H6S3 715 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 CXorf21Q9HAI6 301 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 STMN3Q9NZ72 180 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 ENTPD4Q9Y227 616 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 ZFYVE26Q68DK2 2539 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 ATMQ13315 3056 aa16.95■□□□□ 0.3
TRIM13-206ENST00000457662 FAM208BQ5VWN6 2430 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 K7EM74 188 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 AKAP10O43572 662 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 TBX19O60806 448 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 ZFAND5O76080 213 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 TGDSO95455 350 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 DDX5P17844 614 aaKnown RBP16.94■□□□□ 0.3
TRIM13-206ENST00000457662 NT5EP21589 574 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 SOX11P35716 441 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 RPL3P39023 403 aaKnown RBP16.94■□□□□ 0.3
TRIM13-206ENST00000457662 MFAP5Q13361 173 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 ZNF267Q14586 743 aaPredicted RBP16.94■□□□□ 0.3
TRIM13-206ENST00000457662 CEBPEQ15744 281 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 C6orf163Q5TEZ5 329 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 OGFOD2Q6N063 350 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 IGFL2Q6UWQ7 119 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 HSDL2Q6YN16 418 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 R3HCC1LQ7Z5L2 792 aaKnown RBP16.94■□□□□ 0.3
TRIM13-206ENST00000457662 RPS19BP1Q86WX3 136 aaKnown RBP16.94■□□□□ 0.3
TRIM13-206ENST00000457662 GALNT12Q8IXK2 581 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 CCDC116Q8IYX3 515 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 FAM9CQ8IZT9 166 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 KIF2BQ8N4N8 673 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 OR8K3Q8NH51 312 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 CLHC1Q8NHS4 586 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 ZNF721Q8TF20 911 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 GFM2Q969S9 779 aaKnown RBP16.94■□□□□ 0.3
TRIM13-206ENST00000457662 BBC3Q96PG8 261 aaPredicted RBP16.94■□□□□ 0.3
TRIM13-206ENST00000457662 BBS4Q96RK4 519 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.94■□□□□ 0.3
TRIM13-206ENST00000457662 USH1CQ9Y6N9 552 aa16.94■□□□□ 0.3
TRIM13-206ENST00000457662 TRBV11-1A0A0K0K1C0 115 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 ZNF195O14628 629 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 DPM1O60762 260 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 LRATO95237 230 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 PDGFAP04085 211 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 IGKV3-11P04433 115 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 G6PDP11413 515 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 EPHA3P29320 983 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 MAP4K2Q12851 820 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 MEP1AQ16819 746 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 ACER2Q5QJU3 275 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 B3GNTL1Q67FW5 361 aaPredicted RBP16.93■□□□□ 0.3
TRIM13-206ENST00000457662 FAM180BQ6P0A1 224 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 LINC00696Q6ZRV3 163 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 FAM47EQ6ZV65 393 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 SPATA19Q7Z5L4 167 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 LGI4Q8N135 537 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 PPCDCQ96CD2 204 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 CNPPD1Q9BV87 410 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 WDR55Q9H6Y2 383 aaPredicted RBP16.93■□□□□ 0.3
TRIM13-206ENST00000457662 ZNF223Q9UK11 482 aaPredicted RBP16.93■□□□□ 0.3
TRIM13-206ENST00000457662 MAPRE3Q9UPY8 281 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 IGSF10Q6WRI0 2623 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 CNTRLQ7Z7A1 2325 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 GABRR3A8MPY1 467 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 MYO1GB0I1T2 1018 aa16.93■□□□□ 0.3
TRIM13-206ENST00000457662 CDK2AP1O14519 115 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms