RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 DGAT2L6Q6ZPD8 337 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 PRICKLE2Q7Z3G6 844 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 WDR75Q8IWA0 830 aaKnown RBP9.38□□□□□ -0.91
ATG4A-206ENST00000457035 ST13P4Q8IZP2 240 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-206ENST00000457035 TMEM132CQ8N3T6 1108 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 APCDD1LQ8NCL9 501 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 B3GNT7Q8NFL0 401 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 BRIX1Q8TDN6 353 aaKnown RBP9.38□□□□□ -0.91
ATG4A-206ENST00000457035 PPWD1Q96BP3 646 aaKnown RBP9.38□□□□□ -0.91
ATG4A-206ENST00000457035 C19orf60Q96EN9 201 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 RBM18Q96H35 190 aaKnown RBP9.38□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF681Q96N22 645 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 FAIM2Q9BWQ8 316 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 SLC25A18Q9H1K4 315 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 AKTIPQ9H8T0 292 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 MEAF6Q9HAF1 191 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 ZBTB20Q9HC78 741 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-206ENST00000457035 MYNNQ9NPC7 610 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 SLCO1B3Q9NPD5 702 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 MED4Q9NPJ6 270 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 PFDN4Q9NQP4 134 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 GPR83Q9NYM4 423 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 TAS2R7Q9NYW3 318 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 BAIAP2L1Q9UHR4 511 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 PSME2Q9UL46 239 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 PCDHGB7Q9Y5F8 929 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 CLCA3PQ9Y6N3 262 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 ZGRF1Q86YA3 2104 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF462Q96JM2 2506 aa9.38□□□□□ -0.91
ATG4A-206ENST00000457035 CFAP46Q8IYW2 2715 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 C17orf105B2RV13 164 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 DYNC1I1O14576 645 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 HDAC3O15379 428 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 ERAL1O75616 437 aaKnown RBP9.37□□□□□ -0.91
ATG4A-206ENST00000457035 KITP10721 976 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 CPMP14384 443 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 PORP16435 677 aaPredicted RBP9.37□□□□□ -0.91
ATG4A-206ENST00000457035 SDC1P18827 310 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 TNNI3P19429 210 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 DDCP20711 480 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 SOX18P35713 384 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 SOX11P35716 441 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 AP2B1P63010 937 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 RPL38P63173 70 aaKnown RBP9.37□□□□□ -0.91
ATG4A-206ENST00000457035 EMX2Q04743 252 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 DUSP2Q05923 314 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 NFATC3Q12968 1075 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 CEBPEQ15744 281 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 SMU1Q2TAY7 513 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 AGAP7PQ5VUJ5 663 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 FAM180BQ6P0A1 224 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 IGFL2Q6UWQ7 119 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 RGS9BPQ6ZS82 235 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 LARP4Q71RC2 724 aaKnown RBP eCLIP9.37□□□□□ -0.91
ATG4A-206ENST00000457035 KIF2BQ8N4N8 673 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF321PQ8N8H1 164 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 MORN4Q8NDC4 146 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 C9orf43Q8TAL5 461 aaPredicted RBP9.37□□□□□ -0.91
ATG4A-206ENST00000457035 PIWIL2Q8TC59 973 aaKnown RBP9.37□□□□□ -0.91
ATG4A-206ENST00000457035 LRRC8CQ8TDW0 803 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF721Q8TF20 911 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 DAZLQ92904 295 aaKnown RBP9.37□□□□□ -0.91
ATG4A-206ENST00000457035 TUBGCP3Q96CW5 907 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 CNRIP1Q96F85 164 aaPredicted RBP9.37□□□□□ -0.91
ATG4A-206ENST00000457035 SENP5Q96HI0 755 aaPredicted RBP9.37□□□□□ -0.91
ATG4A-206ENST00000457035 PPP1R36Q96LQ0 422 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 MAGEB18Q96M61 343 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 C7orf26Q96N11 449 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 AGAP4Q96P64 663 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 DGAT2Q96PD7 388 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 LMF1Q96S06 567 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 NPAS2Q99743 824 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 NUF2Q9BZD4 464 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF71Q9NQZ8 489 aaPredicted RBP9.37□□□□□ -0.91
ATG4A-206ENST00000457035 EHD3Q9NZN3 535 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF223Q9UK11 482 aaPredicted RBP9.37□□□□□ -0.91
ATG4A-206ENST00000457035 UTS2RQ9UKP6 389 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 TP53TG5Q9Y2B4 290 aa9.37□□□□□ -0.91
ATG4A-206ENST00000457035 SPENQ96T58 3664 aaKnown RBP9.37□□□□□ -0.91
ATG4A-206ENST00000457035 SLCO1B7G3V0H7 640 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 HRKO00198 91 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 SDHDO14521 159 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 LCE2BO14633 110 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 KLHL41O60662 606 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 TBX19O60806 448 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 IGKV3-11P04433 115 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 FREM3P0C091 2139 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 CSNK2A2P19784 350 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-206ENST00000457035 S1PR1P21453 382 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 FEN1P39748 380 aaKnown RBP9.36□□□□□ -0.91
ATG4A-206ENST00000457035 ALDH9A1P49189 494 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 CLCN2P51788 898 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 PLIN5Q00G26 463 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 MGAT2Q10469 447 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 HSP90B2PQ58FF3 399 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 CRB2Q5IJ48 1285 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 VWA5B1Q5TIE3 1220 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 IL23RQ5VWK5 629 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 B3GNTL1Q67FW5 361 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-206ENST00000457035 IGFL3Q6UXB1 125 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms