RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	CHD3	Q12873	2000 aa	Known RBP	12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953		A0A088AWK7	358 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	POC1B-GALNT4	F8VUJ3	575 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	CASK	O14936	926 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	B3GALT2	O43825	422 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	CTNS	O60931	367 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	ZNF10	P21506	573 aa	Predicted RBP	12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	SAT1	P21673	171 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	GP5	P40197	560 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	MSH2	P43246	934 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	AGFG1	P52594	562 aa	Known RBP	12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	DUSP8	Q13202	625 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	RBBP5	Q15291	538 aa	Known RBP	12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	PIGG	Q5H8A4	983 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	BEND6	Q5SZJ8	279 aa	Predicted RBP	12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	SLC2A12	Q8TD20	617 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	FBXL8	Q96CD0	374 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	NTNG2	Q96CW9	530 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	PERP	Q96FX8	193 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	RBM24	Q9BX46	236 aa	Known RBP	12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	PRDM14	Q9GZV8	571 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	CNIH4	Q9P003	139 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	COPS7A	Q9UBW8	275 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	PSAT1	Q9Y617	370 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	KIAA1549	Q9HCM3	1950 aa		12.08	□□□□□ -0.48
SNHG17-208	ENST00000456953	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	MBD3L3	A6NE82	208 aa	Predicted RBP	12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	C17orf105	B2RV13	164 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	CYR61	O00622	381 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	ERN1	O75460	977 aa	Known RBP	12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	HAUS5	O94927	633 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	AHSG	P02765	367 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	H2AFX	P16104	143 aa	Predicted RBP	12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	FPR1	P21462	350 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	GDF1	P27539	372 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	ANK2	Q01484	3957 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	ASPH	Q12797	758 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	STX4	Q12846	297 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	ILF2	Q12905	390 aa	Known RBP	12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	RCN2	Q14257	317 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	GRTP1	Q5TC63	336 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	PRAMEF20	Q5VT98	475 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	NXPE4	Q6UWF7	544 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	GALNT7	Q86SF2	657 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	PHC2	Q8IXK0	858 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	DND1	Q8IYX4	353 aa	Known RBP	12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	NUBPL	Q8TB37	319 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	SLC22A8	Q8TCC7	542 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	MS4A6E	Q96DS6	147 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	SPACA9	Q96E40	222 aa	Predicted RBP	12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	PAFAH2	Q99487	392 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	CCL19	Q99731	98 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	ALOXE3	Q9BYJ1	711 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	TRIM54	Q9BYV2	358 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	PROK2	Q9HC23	129 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	GALNT8	Q9NY28	637 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	TAS2R13	Q9NYV9	303 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	NDRG3	Q9UGV2	375 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	DYRK1B	Q9Y463	629 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953	DOCK7	Q96N67	2140 aa		12.07	□□□□□ -0.48
SNHG17-208	ENST00000456953		A0A0G2JN53	185 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	LRIT2	A6NDA9	550 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	SMIM23	A6NLE4	172 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	ERI3	O43414	337 aa	Known RBP	12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	CNOT4	O95628	575 aa	Known RBP	12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	C1QA	P02745	245 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	SHBG	P04278	402 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	NUDT17	P0C025	328 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	TNNI3	P19429	210 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	GABRB3	P28472	473 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	HNRNPH1	P31943	449 aa	Known RBP	12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	SPR	P35270	261 aa	Predicted RBP	12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	CPA2	P48052	419 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	SERTAD2	Q14140	314 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	ACKR1	Q16570	336 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	LGSN	Q5TDP6	509 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	VASN	Q6EMK4	673 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	PAQR3	Q6TCH7	311 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	TMPRSS11B	Q86T26	416 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	ZC3HC1	Q86WB0	502 aa	Known RBP	12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	KLHDC8A	Q8IYD2	350 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	SLC15A4	Q8N697	577 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	TTL	Q8NG68	377 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	SLC44A1	Q8WWI5	657 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	LINGO1	Q96FE5	620 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	VPS39	Q96JC1	886 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	JSRP1	Q96MG2	331 aa	Predicted RBP	12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	QRFPR	Q96P65	431 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	TRIB1	Q96RU8	372 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	NDN	Q99608	321 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	DOHH	Q9BU89	302 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	RHOJ	Q9H4E5	214 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	CALHM2	Q9HA72	323 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	PPCS	Q9HAB8	311 aa		12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	RYDEN	Q9NUL5	291 aa	Known RBP	12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	CORO1C	Q9ULV4	474 aa	Predicted RBP	12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	CAMK2A	Q9UQM7	478 aa		12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms