RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 UBXN11Q5T124 520 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 AFMIDQ63HM1 303 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 TUBA3EQ6PEY2 450 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CD200R1LQ6Q8B3 271 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 MOB2Q70IA6 237 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ZER1Q7Z7L7 766 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 LHFPL3Q86UP9 236 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 FAM219AQ8IW50 185 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CCDC36Q8IYA8 594 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC37A3Q8NCC5 494 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 LPCAT1Q8NF37 534 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 WBP2Q969T9 261 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC25A38Q96DW6 304 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 HMCESQ96FZ2 354 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CPEB1Q9BZB8 566 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 RACGAP1Q9H0H5 632 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ABCG5Q9H222 651 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 FBXL4Q9UKA2 621 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 GRIP1Q9Y3R0 1128 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 PCDHGB7Q9Y5F8 929 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 PCDHGB3Q9Y5G1 929 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 PCDHGA5Q9Y5G8 931 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 PCDHGA1Q9Y5H4 931 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 NOTCH3Q9UM47 2321 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 WDR90Q96KV7 1748 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 IQCMA0A1B0GVH7 501 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 A0A1W2PS29 197 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 EFCAB10A6NFE3 127 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 TNFRSF10BO14763 440 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CD3EAPO15446 510 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 AKR7A3O95154 331 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 TBX6O95947 436 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 IGSF6O95976 241 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 TGFB1P01137 390 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 F11P03951 625 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 UROSP10746 265 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 KELP23276 732 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ADH6P28332 368 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CLCN5P51795 746 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 HBA1P69905 142 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 KCTD2Q14681 263 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 GUCA2BQ16661 112 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC5A12Q1EHB4 618 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CLLU1Q5K131 121 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 FAM131AQ6UXB0 335 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SERPINA13PQ6UXR4 307 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 GPRIN3Q6ZVF9 776 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 GOLGA7Q7Z5G4 137 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 BIVMQ86UB2 503 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 VRK3Q8IV63 474 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CFAP52Q8N1V2 620 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF740Q8NDX6 193 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 BRI3BPQ8WY22 251 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 RBPMSQ93062 196 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 MRPL38Q96DV4 380 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 MRPS24Q96EL2 167 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 PPP1R16AQ96I34 528 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 LRIG1Q96JA1 1093 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 GJD4Q96KN9 370 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SMG9Q9H0W8 520 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ABCG4Q9H172 646 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 WDCPQ9H6R7 721 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 NANSQ9NR45 359 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 COMMD8Q9NX08 183 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CCDC59Q9P031 241 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 DHCR7Q9UBM7 475 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 TMCC3Q9ULS5 477 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ATG4BQ9Y4P1 393 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ANAPC1Q9H1A4 1944 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 MFSD2BA6NFX1 497 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 EFCAB7A8K855 629 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ALOX12BO75342 701 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 AP2A2O94973 939 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ESR1P03372 595 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 FGF2P09038 288 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 EFNA5P52803 228 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 BACE1P56817 501 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SRP54P61011 504 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 RPS26P62854 115 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 HGFACQ04756 655 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 EEF1A2Q05639 463 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 IL10RBQ08334 325 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 RPA4Q13156 261 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 MINDY4Q4G0A6 757 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 HECTD3Q5T447 861 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 LBX2Q6XYB7 198 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF767PQ75MW2 155 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 AADATQ8N5Z0 425 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF555Q8NEP9 628 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SETD6Q8TBK2 473 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 PHOSPHO1Q8TCT1 267 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 YIPF5Q969M3 257 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 TPD52L3Q96J77 140 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SERPINB11Q96P15 392 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 COL21A1Q96P44 957 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF382Q96SR6 550 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 GABARAPL1Q9H0R8 117 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 METTL17Q9H7H0 456 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 EVA1AQ9H8M9 152 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms