RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 DEPPQ9NTK1 212 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 HPF1Q9NWY4 346 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 MKS1Q9NXB0 559 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 PLEKHB1Q9UF11 243 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-207ENST00000453796 ERVK-19Q9WJR5 959 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 ZNF835Q9Y2P0 537 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 PCDHA9Q9Y5H5 950 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 NCKAP5O14513 1909 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 ZNF407Q9C0G0 2248 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 A0A1B0GUH1 482 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 ARHGAP10A1A4S6 786 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 C1orf226A1L170 272 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 NPIPA5E9PKD4 350 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 ASNA1O43681 348 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 DYRK3O43781 588 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 PEX1O43933 1283 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 ULK1O75385 1050 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 SLU7O95391 586 aaKnown RBP13.48□□□□□ -0.25
HSPG2-207ENST00000453796 CLDN1O95832 211 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 ENO1P06733 434 aaKnown RBP13.48□□□□□ -0.25
HSPG2-207ENST00000453796 CT62P0C5K7 136 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 KRT4P19013 534 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 PIK3R1P27986 724 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 HMOX2P30519 316 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 FOXA1P55317 472 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 NAA20P61599 178 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 RAE1P78406 368 aaKnown RBP13.48□□□□□ -0.25
HSPG2-207ENST00000453796 ZNF267Q14586 743 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-207ENST00000453796 SLC48A1Q6P1K1 146 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 Q6ZPB1 254 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-207ENST00000453796 FRMD7Q6ZUT3 714 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 MMP21Q8N119 569 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 RIBC1Q8N443 379 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-207ENST00000453796 ZFP62Q8NB50 900 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-207ENST00000453796 OR4K14Q8NGD5 310 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 RDH11Q8TC12 318 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 RIT1Q92963 219 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 CNPPD1Q9BV87 410 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 CXorf21Q9HAI6 301 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 TIMMDC1Q9NPL8 285 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 NMRK1Q9NWW6 199 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 NPIPA1Q9UND3 350 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 TIMM22Q9Y584 194 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 DNAJC13O75165 2243 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 NINQ8N4C6 2090 aa13.48□□□□□ -0.25
HSPG2-207ENST00000453796 OR6C76A6NM76 312 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 KLRC4-KLRK1H3BQV0 150 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 COPEO14579 308 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 OR10H2O60403 315 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 ZNF24P17028 368 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 SOX18P35713 384 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 CA7P43166 264 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 NAGLUP54802 743 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 GPR85P60893 370 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 TRA2BP62995 288 aaKnown RBP13.47□□□□□ -0.25
HSPG2-207ENST00000453796 FUT7Q11130 342 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 ASPHQ12797 758 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 EBPQ15125 230 aaKnown RBP13.47□□□□□ -0.25
HSPG2-207ENST00000453796 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.47□□□□□ -0.25
HSPG2-207ENST00000453796 ZNF750Q32MQ0 723 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 ZNF791Q3KP31 576 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-207ENST00000453796 OPN5Q6U736 354 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 RNF111Q6ZNA4 994 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 TRABD2AQ86V40 505 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 FJX1Q86VR8 437 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 C4orf33Q8N1A6 199 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 CCNYL1Q8N7R7 359 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 GBP7Q8N8V2 638 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-207ENST00000453796 ZNF441Q8N8Z8 693 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 GOLM1Q8NBJ4 401 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 CAVIN3Q969G5 261 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 APIPQ96GX9 242 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 WWTR1Q9GZV5 400 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 SH2D2AQ9NP31 389 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 TNFRSF12AQ9NP84 129 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 MID1IP1Q9NPA3 183 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.47□□□□□ -0.25
HSPG2-207ENST00000453796 OXSMQ9NWU1 459 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 LGALS13Q9UHV8 139 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 MCM8Q9UJA3 840 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 ERVK-11Q9UQG0 969 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 PCNX1Q96RV3 2341 aa13.47□□□□□ -0.25
HSPG2-207ENST00000453796 A0A0G2JMM0 328 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 A0A1W2PPB8 328 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 A0A1W2PRS3 328 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 TLDC2A0PJX2 215 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 A1L4Q6 167 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 PINLYPA6NC86 204 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 KIR3DP1A8MWS1 328 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 H3BQF6 201 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 SLC19A2O60779 497 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 GUCY1B2O75343 617 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 CPMP14384 443 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 CPA3P15088 417 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 PORP16435 677 aaPredicted RBP13.46□□□□□ -0.25
HSPG2-207ENST00000453796 S1PR1P21453 382 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 SSTR4P31391 388 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 RFC3P40938 356 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 XKP51811 444 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 PER3P56645 1201 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms