RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 BBS10Q8TAM1 723 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 PHOSPHO1Q8TCT1 267 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 SGCDQ92629 289 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 GGHQ92820 318 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ABCG5Q9H222 651 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 FBXL12Q9NXK8 326 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 GMEB2Q9UKD1 530 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 COLEC10Q9Y6Z7 277 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ZNF878C9JN71 531 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ZNF821O75541 412 aaPredicted RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 KLF8O95600 359 aaPredicted RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 JUPP14923 745 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 IGFALSP35858 605 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 RPL35P42766 123 aaKnown RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 CDKN2CP42773 168 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 PPP5CP53041 499 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 DEFB103AP81534 67 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 SQSTM1Q13501 440 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ARFRP1Q13795 201 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 MARCH8Q5T0T0 291 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 CNKSR3Q6P9H4 555 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ZCCHC12Q6PEW1 402 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 PAPD5Q8NDF8 572 aaKnown RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 TBC1D15Q8TC07 691 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 TAPBPLQ9BX59 468 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ZNF350Q9GZX5 532 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 TMEM185BQ9H7F4 350 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 MGAT4CQ9UBM8 478 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 POM121CA8CG34 1229 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 EEF1E1-BLOC1S5C9J1V9 151 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 CFIP05156 583 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 C1GALT1C1LP0DN25 315 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 UQCRC2P22695 453 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 DNASE1P24855 282 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 TACR1P25103 407 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 MAGEA2P43356 314 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 CLCN7P51798 805 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 INHBCP55103 352 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 DEFB110Q30KQ9 67 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 PGM2L1Q6PCE3 622 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 C6orf120Q7Z4R8 191 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 ZNF557Q8N988 423 aaPredicted RBP7.4□□□□□ -1.22
RIF1-206ENST00000453091 GTPBP2Q9BX10 602 aaKnown RBP7.4□□□□□ -1.22
RIF1-206ENST00000453091 CUEDC1Q9NWM3 386 aaPredicted RBP7.4□□□□□ -1.22
RIF1-206ENST00000453091 HCN3Q9P1Z3 774 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 CYP8B1Q9UNU6 501 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 ERVW-1Q9UQF0 538 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 FMN2Q9NZ56 1722 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 IGKV6D-21A0A0A0MT36 114 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 CLCA1A8K7I4 914 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 UBFD1O14562 309 aaKnown RBP7.4□□□□□ -1.22
RIF1-206ENST00000453091 UPK1BO75841 260 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 RENP00797 406 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 CD9P21926 228 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 CXCR1P25024 350 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 EVI2BP34910 448 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 CLDN10P78369 228 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 MAD2L1BPQ15013 274 aaPredicted RBP7.4□□□□□ -1.22
RIF1-206ENST00000453091 ANKRD54Q6NXT1 300 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 LRRN1Q6UXK5 716 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 DNAJA4Q8WW22 397 aaPredicted RBP7.4□□□□□ -1.22
RIF1-206ENST00000453091 STUB1Q9UNE7 303 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 HMX2A2RU54 273 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 MUSKO15146 869 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 CDC40O60508 579 aaKnown RBP eCLIP7.4□□□□□ -1.22
RIF1-206ENST00000453091 SDC3O75056 442 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 CLEC2LP0C7M8 214 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 PSMB10P40306 273 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 GNG2P59768 71 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 GRK1Q15835 563 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 UBE2Q1Q7Z7E8 422 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 PGBD5Q8N414 524 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 RHEBL1Q8TAI7 183 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 ZDHHC1Q8WTX9 485 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 SLC6A7Q99884 636 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 DPYSL5Q9BPU6 564 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 CST11Q9H112 138 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 NUDT15Q9NV35 164 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 EXOSC1Q9Y3B2 195 aaKnown RBP7.4□□□□□ -1.22
RIF1-206ENST00000453091 CSNK1G3Q9Y6M4 447 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 A0A0G2JPF8 293 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 UNC119BA6NIH7 251 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 HNRNPCL3B7ZW38 293 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 HNRNPCL4P0DMR1 293 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 BMP1P13497 986 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 SDC1P18827 310 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 PTPN6P29350 595 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 SNU13P55769 128 aaKnown RBP7.4□□□□□ -1.22
RIF1-206ENST00000453091 AP1S2P56377 157 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 CTSL3PQ5NE16 218 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 OR2G6Q5TZ20 316 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 PM20D1Q6GTS8 502 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 SERINC5Q86VE9 423 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 TMC8Q8IU68 726 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 NRMQ8IXM6 262 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 DCAF4L2Q8NA75 395 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 B3GNT7Q8NFL0 401 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 OR4K13Q8NH42 304 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 TEX37Q96LM6 180 aa7.4□□□□□ -1.22
RIF1-206ENST00000453091 VRTNQ9H8Y1 702 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms