RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 NPIPA5A0A0B4J1W7 369 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 NPIPA7E9PJI5 369 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 SOX30O94993 753 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 RB1P06400 928 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 ASGR2P07307 311 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 CCNYL3P0C7X3 344 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 NPIPA8P0DM63 369 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 CBLP22681 906 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 DDX6P26196 483 aaKnown RBP eCLIP10.63□□□□□ -0.714e-7■■□□□ 13.4
DDR1-239ENST00000452441 IL18R1Q13478 541 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 RUNX3Q13761 415 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 UBXN2BQ14CS0 331 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 KHDRBS2Q5VWX1 349 aaKnown RBP10.63□□□□□ -0.71
DDR1-239ENST00000452441 C22orf42Q6IC83 251 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 ASB18Q6ZVZ8 466 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 RNF44Q7L0R7 432 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 AKAP14Q86UN6 197 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.63□□□□□ -0.71
DDR1-239ENST00000452441 ITPKCQ96DU7 683 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 RPP25Q9BUL9 199 aaKnown RBP10.63□□□□□ -0.71
DDR1-239ENST00000452441 HDHD5Q9BXW7 423 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 CCNB1IP1Q9NPC3 277 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 PTGFRNQ9P2B2 879 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 NBASA2RRP1 2371 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 USP34Q70CQ2 3546 aa10.63□□□□□ -0.71
DDR1-239ENST00000452441 TRBV4-1A0A0J9YWV2 114 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 LRRC72A6NJI9 287 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 FAM183AA6NL82 134 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 TNFRSF21O75509 655 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 GASTP01350 101 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 MRPL3P09001 348 aaKnown RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 ALAS2P22557 587 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 HEPACAMQ14CZ8 416 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 C10orf62Q5T681 223 aaPredicted RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 TRIM46Q7Z4K8 759 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 ENTHD1Q8IYW4 607 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 BBS10Q8TAM1 723 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 MAGIXQ9H6Y5 334 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 EYSQ5T1H1 3165 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 NUAK1O60285 661 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 SAGP10523 405 aaPredicted RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 POLR2CP19387 275 aaPredicted RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 PAICSP22234 425 aaKnown RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 CD6P30203 668 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 RCVRNP35243 200 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 RGS8P57771 180 aaPredicted RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 TEAD4Q15561 434 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 MTFR2Q6P444 385 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 MFSD4AQ8N468 514 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 C19orf18Q8NEA5 215 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 FAM46DQ8NEK8 389 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 OR51L1Q8NGJ5 315 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 ENKURQ8TC29 256 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 PBX4Q9BYU1 374 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 RETREG1Q9H6L5 497 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 NMNAT1Q9HAN9 279 aaPredicted RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 SERHLQ9NQF3 203 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 ENTPD6O75354 484 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 DNAJB5O75953 348 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 KLF8O95600 359 aaPredicted RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 NTN1O95631 604 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 CD40LGP29965 261 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 BTN3A2P78410 334 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 LSM11P83369 360 aaKnown RBP eCLIP10.62□□□□□ -0.71
DDR1-239ENST00000452441 ZSWIM7Q19AV6 140 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 DEFB110Q30KQ9 67 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 HNRNPA1L2Q32P51 320 aaKnown RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 AMZ1Q400G9 498 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 SPIN4Q56A73 249 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 OR2G6Q5TZ20 316 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 LIPJQ5W064 366 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 KBTBD8Q8NFY9 601 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 DYNC2LI1Q8TCX1 351 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 VMP1Q96GC9 406 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 PDLIM5Q96HC4 596 aaKnown RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 CITED4Q96RK1 184 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 ZNF607Q96SK3 696 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 ASPNQ9BXN1 380 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 CPEB1Q9BZB8 566 aaKnown RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 MRPS30Q9NP92 439 aaKnown RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 TEX10Q9NXF1 929 aaPredicted RBP10.62□□□□□ -0.71
DDR1-239ENST00000452441 SSR3Q9UNL2 185 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 ZNF232Q9UNY5 417 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 STON1Q9Y6Q2 735 aa10.62□□□□□ -0.71
DDR1-239ENST00000452441 B4DGG1 531 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 OXSR1O95747 527 aaPredicted RBP10.61□□□□□ -0.71
DDR1-239ENST00000452441 TGM1P22735 817 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 GPR4P46093 362 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 SELENOWP63302 87 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 GINS1Q14691 196 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 KCNJ8Q15842 424 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 TMEM240Q5SV17 173 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 ATAD3BQ5T9A4 648 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 TMPRSS11AQ6ZMR5 421 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 ADAMTS15Q8TE58 950 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 GRHL3Q8TE85 626 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 GGHQ92820 318 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 USP7Q93009 1102 aa10.61□□□□□ -0.71
DDR1-239ENST00000452441 ZNF300Q96RE9 604 aaPredicted RBP10.61□□□□□ -0.71
DDR1-239ENST00000452441 DUSP21Q9H596 190 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms