RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 AURKBQ96GD4 344 aaPredicted RBP13.72□□□□□ -0.21
TNF-208ENST00000449264 ALOXE3Q9BYJ1 711 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 TRIM8Q9BZR9 551 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 TGIF2Q9GZN2 237 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 VN1R1Q9GZP7 353 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 PAIP1Q9H074 479 aaKnown RBP13.72□□□□□ -0.21
TNF-208ENST00000449264 NEUROD4Q9HD90 331 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 NECTIN3Q9NQS3 549 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 TAS2R9Q9NYW1 312 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 VAPAQ9P0L0 249 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 CROTQ9UKG9 612 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 VPS4AQ9UN37 437 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 MMACHCQ9Y4U1 282 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 ERN1O75460 977 aaKnown RBP13.72□□□□□ -0.21
TNF-208ENST00000449264 ONECUT2O95948 504 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 IFNA16P05015 189 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 NT5EP21589 574 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 PTPN4P29074 926 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 CPOXP36551 454 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 EFNA3P52797 238 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 RHAGQ02094 409 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 NCF4Q15080 339 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 CEBPEQ15744 281 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 FAM69BQ5VUD6 431 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 FAAH2Q6GMR7 532 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 MRPL14Q6P1L8 145 aaKnown RBP13.72□□□□□ -0.21
TNF-208ENST00000449264 TMEM107Q6UX40 140 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 C16orf89Q6UX73 402 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 KIF2BQ8N4N8 673 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 PPWD1Q96BP3 646 aaKnown RBP13.72□□□□□ -0.21
TNF-208ENST00000449264 MAGED4Q96JG8 741 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 SLC46A1Q96NT5 459 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 CGREF1Q99674 301 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 CXorf36Q9H7Y0 433 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 NDE1Q9NXR1 346 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 TAS2R1Q9NYW7 299 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 ACSL6Q9UKU0 697 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 PADI1Q9ULC6 663 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 ERVK-11Q9UQG0 969 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 PCDHB14Q9Y5E9 798 aa13.72□□□□□ -0.21
TNF-208ENST00000449264 ALBP02768 609 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 HEXBP07686 556 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 TRPC1P48995 793 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 PSME3P61289 254 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 MRPS35P82673 323 aaKnown RBP13.71□□□□□ -0.21
TNF-208ENST00000449264 NSDHLQ15738 373 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 SPDYE7PQ495Y7 208 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 LRIF1Q5T3J3 769 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 ANGPTL8Q6UXH0 198 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 HACD2Q6Y1H2 254 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 ZNF517Q6ZMY9 492 aaPredicted RBP13.71□□□□□ -0.21
TNF-208ENST00000449264 MSRB3Q8IXL7 192 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 PGAM4Q8N0Y7 254 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 KAT2AQ92830 837 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 DGAT2Q96PD7 388 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 SPSB2Q99619 263 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 BTBD10Q9BSF8 475 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 CRB3Q9BUF7 120 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 SLC26A1Q9H2B4 701 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 SLC25A37Q9NYZ2 338 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 NEUROG3Q9Y4Z2 214 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 CLDN16Q9Y5I7 305 aa13.71□□□□□ -0.21
TNF-208ENST00000449264 RNF103-CHMP3A0A140T963 221 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 VSTM2BA6NLU5 285 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 IDSB3KWA1 339 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 STMND1H3BQB6 276 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 RECKO95980 971 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 ATP1B1P05026 303 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 SLC35E2P0CK97 266 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 PTPN6P29350 595 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 MC3RP41968 323 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 MTPNP58546 118 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 IGLV3-21P80748 117 aaPredicted RBP13.7□□□□□ -0.22
TNF-208ENST00000449264 SERTAD2Q14140 314 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 MLC1Q15049 377 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 DNAL1Q4LDG9 190 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 MED25Q71SY5 747 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 ST13P4Q8IZP2 240 aaPredicted RBP13.7□□□□□ -0.22
TNF-208ENST00000449264 NLGN4XQ8N0W4 816 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 ESX1Q8N693 406 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 TRIML2Q8N7C3 387 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 ENDOVQ8N8Q3 282 aaKnown RBP13.7□□□□□ -0.22
TNF-208ENST00000449264 NLGN4YQ8NFZ3 816 aaPredicted RBP13.7□□□□□ -0.22
TNF-208ENST00000449264 DNAJB8Q8NHS0 232 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 GOT1L1Q8NHS2 421 aaPredicted RBP13.7□□□□□ -0.22
TNF-208ENST00000449264 PNPT1Q8TCS8 783 aaKnown RBP13.7□□□□□ -0.22
TNF-208ENST00000449264 CT55Q8WUE5 264 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 RBM18Q96H35 190 aaKnown RBP13.7□□□□□ -0.22
TNF-208ENST00000449264 SLC35A5Q9BS91 424 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 TMEM121BQ9BXQ6 578 aaPredicted RBP13.7□□□□□ -0.22
TNF-208ENST00000449264 SPRY4Q9C004 299 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 C1orf21Q9H246 121 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 LRMDAQ9H2I8 198 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 WDR54Q9H977 334 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 PNO1Q9NRX1 252 aaKnown RBP13.7□□□□□ -0.22
TNF-208ENST00000449264 SEMA3GQ9NS98 782 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 SIRT3Q9NTG7 399 aaPredicted RBP13.7□□□□□ -0.22
TNF-208ENST00000449264 C3orf18Q9UK00 162 aa13.7□□□□□ -0.22
TNF-208ENST00000449264 NXT1Q9UKK6 140 aaKnown RBP13.7□□□□□ -0.22
TNF-208ENST00000449264 PTRH2Q9Y3E5 179 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms