RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 OR52E8Q6IFG1 317 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 GALNT18Q6P9A2 607 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 EMBQ6PCB8 327 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 GFRALQ6UXV0 394 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 FRMD7Q6ZUT3 714 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 TRABD2AQ86V40 505 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 GPALPP1Q8IXQ4 340 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 MMP21Q8N119 569 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 C4orf33Q8N1A6 199 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 CYP4Z2PQ8N1L4 340 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 CPSF7Q8N684 471 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 C1orf52Q8N6N3 182 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 CCNYL1Q8N7R7 359 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 BANPQ8N9N5 519 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 ZFP62Q8NB50 900 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 OR4K14Q8NGD5 310 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 C16orf52Q8NHV5 167 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 RDH11Q8TC12 318 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 SREK1Q8WXA9 508 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 RIT1Q92963 219 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 CAVIN3Q969G5 261 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 GPR137Q96N19 417 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 KCNA7Q96RP8 456 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 PELOQ9BRX2 385 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 TMEM109Q9BVC6 243 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 WDR41Q9HAD4 459 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 SH2D2AQ9NP31 389 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 NMRK1Q9NWW6 199 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 SEC14L3Q9UDX4 400 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 PLLPQ9Y342 182 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 CELSR2Q9HCU4 2923 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 TLDC2A0PJX2 215 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 COPEO14579 308 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 ASNA1O43681 348 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 PEX1O43933 1283 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 CT62P0C5K7 136 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 CPMP14384 443 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 MAPK12P53778 367 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 NAA20P61599 178 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 ERCC6LQ2NKX8 1250 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 ZNF791Q3KP31 576 aaPredicted RBP13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 SLC48A1Q6P1K1 146 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 IL20RBQ6UXL0 311 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 FGD2Q7Z6J4 655 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 MREGQ8N565 214 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 ZNF615Q8N8J6 731 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 ZNF441Q8N8Z8 693 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 TMEM125Q96AQ2 219 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 APIPQ96GX9 242 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 ZNF681Q96N22 645 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 PARD6BQ9BYG5 372 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 ROPN1BQ9BZX4 212 aaPredicted RBP13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 ROPN1Q9HAT0 212 aaPredicted RBP13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 MKS1Q9NXB0 559 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 HEY2Q9UBP5 337 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 STK38LQ9Y2H1 464 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 KLF13Q9Y2Y9 288 aaPredicted RBP13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 CCL27Q9Y4X3 112 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 ZNF407Q9C0G0 2248 aa13.02□□□□□ -0.33
RTFDC1-204ENST00000449062 C1orf226A1L170 272 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 PINLYPA6NC86 204 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 ESPNB1AK53 854 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 NPIPA5E9PKD4 350 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 KLRC4-KLRK1H3BQV0 150 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 GUCY1B2O75343 617 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 PIK3R1P27986 724 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 SERPINB3P29508 390 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 ERVK-8P63133 956 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 HMGCS1Q01581 520 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 ALDH6A1Q02252 535 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 DUSP2Q05923 314 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 ASPHQ12797 758 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 MAP4K2Q12851 820 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 SCIMPQ6UWF3 145 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 Q6ZPB1 254 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 TRIM46Q7Z4K8 759 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 RIBC1Q8N443 379 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 SLC15A4Q8N697 577 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 POGLUT1Q8NBL1 392 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 PSD4Q8NDX1 1056 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 CTHRC1Q96CG8 243 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 ART5Q96L15 291 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 SGCZQ96LD1 299 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 GATA5Q9BWX5 397 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 TSPAN10Q9H1Z9 355 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 MID1IP1Q9NPA3 183 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 COPS7AQ9UBW8 275 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 ZNF639Q9UID6 485 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 MCM8Q9UJA3 840 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 RAB21Q9UL25 225 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 NPIPA1Q9UND3 350 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 ERVK-19Q9WJR5 959 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 V9GYY5 206 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 DNAJC13O75165 2243 aa13.01□□□□□ -0.33
RTFDC1-204ENST00000449062 A0A1B0GUH1 482 aa13□□□□□ -0.33
RTFDC1-204ENST00000449062 ARHGAP10A1A4S6 786 aa13□□□□□ -0.33
RTFDC1-204ENST00000449062 OR6C76A6NM76 312 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms