RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ERN1O75460 977 aaKnown RBP13.17□□□□□ -0.3
SHMT2-203ENST00000449049 ATP5HO75947 161 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 KCNH1O95259 989 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 NPPAP01160 153 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 PTPN6P29350 595 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 CDKN2CP42773 168 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 NUDT2P50583 147 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 SPRED3Q2MJR0 410 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 TRMT5Q32P41 509 aaKnown RBP13.17□□□□□ -0.3
SHMT2-203ENST00000449049 C6orf10Q5SRN2 563 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 DLEU7Q6UYE1 221 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 ZNF551Q7Z340 670 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-203ENST00000449049 PRSS58Q8IYP2 241 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 TSLPQ969D9 159 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 ROPN1LQ96C74 230 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 PANX1Q96RD7 426 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 TACO1Q9BSH4 297 aaKnown RBP13.17□□□□□ -0.3
SHMT2-203ENST00000449049 ALOXE3Q9BYJ1 711 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 TRIM4Q9C037 500 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 FAM117AQ9C073 453 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 PAIP1Q9H074 479 aaKnown RBP13.17□□□□□ -0.3
SHMT2-203ENST00000449049 NEUROD4Q9HD90 331 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 TAS2R9Q9NYW1 312 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 SLAMF8Q9P0V8 285 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 IDSB3KWA1 339 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 FXYD1O00168 92 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 BRINP1O60477 761 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 KLF7O75840 302 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-203ENST00000449049 ZCCHC18P0CG32 403 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 STAT5AP42229 794 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 STT3AP46977 705 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 FOXL2P58012 376 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 PLIN5Q00G26 463 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 HSPB3Q12988 150 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 NFYCQ13952 458 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 LACTB2Q53H82 288 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-203ENST00000449049 C8orf82Q6P1X6 216 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-203ENST00000449049 SHISA6Q6ZSJ9 500 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 DHDDSQ86SQ9 333 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 TMEM151BQ8IW70 566 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 ST13P4Q8IZP2 240 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-203ENST00000449049 OR4A15Q8NGL6 344 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 FBXO27Q8NI29 283 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 NXPE2Q96DL1 559 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 PELOQ9BRX2 385 aaKnown RBP13.16□□□□□ -0.3
SHMT2-203ENST00000449049 THSD1Q9NS62 852 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 SLC6A13Q9NSD5 602 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 SIRT3Q9NTG7 399 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-203ENST00000449049 PCDHGB4Q9UN71 923 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 NEUROG3Q9Y4Z2 214 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 TRBV5-3A0A0A0MS03 114 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 B2RBV5 119 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 TERTO14746 1132 aaKnown RBP13.16□□□□□ -0.3
SHMT2-203ENST00000449049 CPSF4O95639 269 aaKnown RBP13.16□□□□□ -0.3
SHMT2-203ENST00000449049 HEXBP07686 556 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 IFI6P09912 130 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 GALNSP34059 522 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 CPOXP36551 454 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 ART3Q13508 389 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 RINLQ6ZS11 566 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 DTX1Q86Y01 620 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 MSRB3Q8IXL7 192 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 ENDOVQ8N8Q3 282 aaKnown RBP13.16□□□□□ -0.3
SHMT2-203ENST00000449049 OR9A2Q8NGT5 310 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 OR2Y1Q8NGV0 311 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 SLC7A6OSQ96CW6 309 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-203ENST00000449049 C1orf21Q9H246 121 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 CXorf36Q9H7Y0 433 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 GID8Q9NWU2 228 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 C3orf18Q9UK00 162 aa13.16□□□□□ -0.3
SHMT2-203ENST00000449049 MYOCOSA0A1B0GUC4 107 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 C21orf140B9A014 251 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 SLITRK5O94991 958 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 KRT16P08779 473 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 TCN2P20062 427 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 CDK9P50750 372 aaKnown RBP13.15□□□□□ -0.3
SHMT2-203ENST00000449049 EMP2P54851 167 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 LTB4RQ15722 352 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 NSDHLQ15738 373 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 ZNF628Q5EBL2 1059 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 DNAJC14Q6Y2X3 702 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-203ENST00000449049 RBM15BQ8NDT2 890 aaKnown RBP13.15□□□□□ -0.3
SHMT2-203ENST00000449049 ZNF675Q8TD23 568 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 LRRC58Q96CX6 371 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 DGAT2Q96PD7 388 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 CRB3Q9BUF7 120 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 SLC25A37Q9NYZ2 338 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 VAPAQ9P0L0 249 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 CROTQ9UKG9 612 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 VPS4AQ9UN37 437 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 PADI2Q9Y2J8 665 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 PCDHB14Q9Y5E9 798 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 AK5Q9Y6K8 562 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 TRABD2BA6NFA1 517 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 PLOD2O00469 737 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 OR10H2O60403 315 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 ALOX12BO75342 701 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 GSNP06396 782 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 UMODP07911 640 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms