RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 SYBUQ9NX95 663 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 CRLS1Q9UJA2 301 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 KLHL21Q9UJP4 597 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 TTC7AQ9ULT0 858 aaPredicted RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 SLC6A5Q9Y345 797 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 PLCE1Q9P212 2302 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 TRBV5-4A0A0C4DH59 114 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 F8VZ95 297 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 H7C417 338 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 KCNK1O00180 336 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 NDUFS8O00217 210 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 WWP2O00308 870 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 PSMA7O14818 248 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 AP2A2O94973 939 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 EPOP01588 193 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 EZRP15311 586 aaKnown RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 DESP17661 470 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 CHMP24386 653 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 PSMA2P25787 234 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 SYKP43405 635 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 CDK9P50750 372 aaKnown RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 PNLIPRP1P54315 467 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 EIF3BP55884 814 aaKnown RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 LOXL3P58215 753 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 BTG2P78543 158 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 CUL4AQ13619 759 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 PKP1Q13835 747 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 SIRPB2Q5JXA9 342 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 FAM182AQ5T1J6 154 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 CCDC183Q5T5S1 534 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 CCDC70Q6NSX1 233 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 VN1R4Q7Z5H5 301 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 SLC22A15Q8IZD6 547 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 OR5T3Q8NGG3 340 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 HTRA1Q92743 480 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 NCLNQ969V3 563 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 TBC1D20Q96BZ9 403 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 CTHRC1Q96CG8 243 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 CCDC138Q96M89 665 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 GSDMAQ96QA5 445 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 RMND1Q9NWS8 449 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 AIPL1Q9NZN9 384 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 FETUBQ9UGM5 382 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 PABPN1LA6NDY0 278 aaKnown RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 SCAMP2O15127 329 aaKnown RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 STX7O15400 261 aaKnown RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 CLOCKO15516 846 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 HCRTR2O43614 444 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 TRIM3O75382 744 aaPredicted RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 GPC4O75487 556 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 MYO1DO94832 1006 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 TGM6O95932 706 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 PRB2P02812 416 aaPredicted RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 RPN2P04844 631 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 PKMP14618 531 aaKnown RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 TCF4P15884 667 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 MAOAP21397 527 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 JAK1P23458 1154 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 PTPN3P26045 913 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 ACRV1P26436 265 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 GDF1P27539 372 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 CMPK1P30085 196 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 NDUFA8P51970 172 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 DVL1P1P54792 670 aaPredicted RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 NAGLUP54802 743 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 IL13RA1P78552 427 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 ZNF844Q08AG5 666 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 TBL3Q12788 808 aaKnown RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 ICAM4Q14773 271 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 BRD3Q15059 726 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 RABEP1Q15276 862 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 RAB35Q15286 201 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 ZSWIM7Q19AV6 140 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 ZNF791Q3KP31 576 aaPredicted RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 SLC22A10Q63ZE4 541 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 DCUN1D2Q6PH85 259 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 OPN5Q6U736 354 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 STAC2Q6ZMT1 411 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 SNX20Q7Z614 316 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 KIAA1328Q86T90 577 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 VRK3Q8IV63 474 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 SVOPLQ8N434 492 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 ZNF610Q8N9Z0 462 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 KBTBD8Q8NFY9 601 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 OR4K2Q8NGD2 314 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 MRAPQ8TCY5 172 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 BLOC1S5Q8TDH9 187 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 ELMO1Q92556 727 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 ABTB1Q969K4 478 aaPredicted RBP2.91□□□□□ -1.94
PMS1-215ENST00000447232 KLHL4Q9C0H6 718 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 OR10A4Q9H209 315 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 ARNT2Q9HBZ2 717 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 NECTIN3Q9NQS3 549 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 FAIMQ9NVQ4 179 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 SAMD15Q9P1V8 674 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 RCOR1Q9UKL0 485 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 SLC39A10Q9ULF5 831 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 USP22Q9UPT9 525 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 SPEF1Q9Y4P9 236 aa2.91□□□□□ -1.94
PMS1-215ENST00000447232 CLDN16Q9Y5I7 305 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms