RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 NUDT13Q86X67 352 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 TMEM251Q8N6I4 163 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 ZNF483Q8TF39 744 aaPredicted RBP19.16■□□□□ 0.66
SDC1-205ENST00000447124 RIT1Q92963 219 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 FAM173AQ9BQD7 235 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 CNPPD1Q9BV87 410 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 PROK2Q9HC23 129 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 TEX10Q9NXF1 929 aaPredicted RBP19.16■□□□□ 0.66
SDC1-205ENST00000447124 TUBA8Q9NY65 449 aaPredicted RBP19.16■□□□□ 0.66
SDC1-205ENST00000447124 FBN2P35556 2912 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 A8MT66 165 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 SLC35E2P0CK97 266 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 GALNSP34059 522 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 PIGAP37287 484 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 TTC19Q6DKK2 380 aaPredicted RBP19.15■□□□□ 0.66
SDC1-205ENST00000447124 LETMD1Q6P1Q0 360 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 ARHGAP11AQ6P4F7 1023 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 TIFABQ6ZNK6 161 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 RPRMLQ8N4K4 120 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 ART5Q96L15 291 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 C1QTNF3Q9BXJ4 246 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 MRPL1Q9BYD6 325 aaKnown RBP19.15■□□□□ 0.66
SDC1-205ENST00000447124 IL1RL2Q9HB29 575 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 SACM1LQ9NTJ5 587 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 TMEM216Q9P0N5 145 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 LIPGQ9Y5X9 500 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 NINQ8N4C6 2090 aa19.15■□□□□ 0.66
SDC1-205ENST00000447124 CSMD1Q96PZ7 3565 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 IQANK1A0A1B0GTG1 560 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 DYRK3O43781 588 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 OR10H2O60403 315 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 CELA3AP09093 270 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 CT62P0C5K7 136 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 HYAL4Q2M3T9 481 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 GGTA1PQ4G0N0 100 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 GXYLT1Q4G148 440 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 UNC50Q53HI1 259 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 RGS9BPQ6ZS82 235 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 FAM47EQ6ZV65 393 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 ZNF295-AS1Q8N0V1 137 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 METTL4Q8N3J2 472 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 SLC15A4Q8N697 577 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 PELOQ9BRX2 385 aaKnown RBP19.14■□□□□ 0.65
SDC1-205ENST00000447124 WDR41Q9HAD4 459 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 CXorf21Q9HAI6 301 aa19.14■□□□□ 0.65
SDC1-205ENST00000447124 EXOC1LA0A1B0GW35 172 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 NPIPA2E9PIF3 369 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 NPIPA3F8WFD2 350 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 PDYNP01213 254 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 IGHG3P01860 377 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 P04436 131 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 ABHD2P08910 425 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 FAM153BP0C7A2 387 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 TNFRSF8P28908 595 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 SSTR4P31391 388 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 HSD17B3P37058 310 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 MAGEA5P43359 124 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 IFT88Q13099 833 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 EBPQ15125 230 aaKnown RBP19.13■□□□□ 0.65
SDC1-205ENST00000447124 FAM153CQ494X1 144 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 NDUFAF5Q5TEU4 345 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 SLC22A10Q63ZE4 541 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 OR52E8Q6IFG1 317 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 RNF111Q6ZNA4 994 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 GK5Q6ZS86 529 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 SLC22A16Q86VW1 577 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 ZNF441Q8N8Z8 693 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 SLC22A8Q8TCC7 542 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 TRPC4APQ8TEL6 797 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 PAQR8Q8TEZ7 354 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 SDCCAG3Q96C92 435 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 SPACA9Q96E40 222 aaPredicted RBP19.13■□□□□ 0.65
SDC1-205ENST00000447124 WWTR1Q9GZV5 400 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 AHSPQ9NZD4 102 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 ADAM29Q9UKF5 820 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 CES1P1Q9UKY3 287 aa19.13■□□□□ 0.65
SDC1-205ENST00000447124 A0A1B0GVC2 190 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 ACOT7O00154 380 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 RIPK2O43353 540 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 DLX3O60479 287 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 FBXO45P0C2W1 286 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 XKP51811 444 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 GALNT1Q10472 559 aaPredicted RBP19.12■□□□□ 0.65
SDC1-205ENST00000447124 FUT7Q11130 342 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 TBL3Q12788 808 aaKnown RBP19.12■□□□□ 0.65
SDC1-205ENST00000447124 TEX35Q5T0J7 233 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 CCNYL2Q5T2Q4 361 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 LGSNQ5TDP6 509 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 PAOXQ6QHF9 649 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 TMEM64Q6YI46 380 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 TRILQ7L0X0 811 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 MMP21Q8N119 569 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 FAM109AQ8N4B1 249 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 MYRIPQ8NFW9 859 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 OR4K14Q8NGD5 310 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 KIF18AQ8NI77 898 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 GAL3ST4Q96RP7 486 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 TXLNGYQ9BZA5 131 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 EPB41L4BQ9H329 900 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 ELOVL6Q9H5J4 265 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms