RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 FAM110BQ8TC76 370 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 TMEM40Q8WWA1 233 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 PFDN5Q99471 154 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 HAPLN2Q9GZV7 340 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 OR51B5Q9H339 312 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 SLA2Q9H6Q3 261 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 LIN28AQ9H9Z2 209 aaKnown RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 PRKAB1Q9Y478 270 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 MUSKO15146 869 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 DENRO43583 198 aaKnown RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 CYP17A1P05093 508 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 GNAO1P09471 354 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 ACY1Q03154 408 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 RELAQ04206 551 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 ABCA11PQ4W5N1 156 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 FAM76BQ5HYJ3 339 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 TMEM198Q66K66 360 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 SUSD1Q6UWL2 747 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 LCTLQ6UWM7 567 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 ASB18Q6ZVZ8 466 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 MR1Q95460 341 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 BIRC7Q96CA5 298 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 SERINC2Q96SA4 455 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 CHIAQ9BZP6 476 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 NKX2-4Q9H2Z4 354 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 ALKBH4Q9NXW9 302 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 PAK4O96013 591 aaPredicted RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 DBIP07108 87 aaKnown RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 SRCP12931 536 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 GRK5P34947 590 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 DGKQP52824 942 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 CDH11P55287 796 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 RPS3AP61247 264 aaKnown RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 MFSD13AQ14CX5 517 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 HNRNPA1L2Q32P51 320 aaKnown RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 C3P1Q6ZMU1 363 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 SMPDL3BQ92485 455 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 FAM3CQ92520 227 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 TANKQ92844 425 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 COQ8BQ96D53 544 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 PCDHAC1Q9H158 963 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 CWH43Q9H720 699 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 RARRES3Q9UL19 164 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 KCTD3Q9Y597 815 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 DLGAP1O14490 977 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 CLEC3AO75596 197 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 RP2O75695 350 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 TRAPPC6AO75865 159 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 OR2B3O76000 313 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 SCGNO76038 276 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 GSTT2P0CG29 244 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 CKMT2P17540 419 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 OR3A3P47888 321 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 OR3A2P47893 321 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 PLP2Q04941 152 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 CSTF1Q05048 431 aaKnown RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 ZMYND11Q15326 602 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 NANOGP8Q6NSW7 305 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 ARHGAP11AQ6P4F7 1023 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 BLOC1S3Q6QNY0 202 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 PDZD3Q86UT5 571 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 IGDCC3Q8IVU1 814 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 MRPL43Q8N983 215 aaKnown RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 FAM156AQ8NDB6 213 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 VN1R2Q8NFZ6 395 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 CANT1Q8WVQ1 401 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 JPH3Q8WXH2 748 aaPredicted RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 NANOGQ9H9S0 305 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 USP3Q9Y6I4 520 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 FOXO6A8MYZ6 492 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 ACOT7O00154 380 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 RFPL2O75678 378 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 TFPTP0C1Z6 253 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 MTHFD1P11586 935 aaKnown RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 XRCC1P18887 633 aaPredicted RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 PGCP20142 388 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 SLC10A2Q12908 348 aaPredicted RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 RHEBQ15382 184 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 RNASE12Q5GAN4 147 aaKnown RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 KCTD18Q6PI47 426 aaPredicted RBP6.73□□□□□ -1.33
CDK12-202ENST00000447079 ALKAL1Q6UXT8 129 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 ZNF765Q7L2R6 523 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 PKP2Q99959 881 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 COMMD3Q9UBI1 195 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 TMPRSS11EQ9UL52 423 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 PLAGL1Q9UM63 463 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 TRPM6Q9BX84 2022 aa6.73□□□□□ -1.33
CDK12-202ENST00000447079 A8MU76 341 aa6.72□□□□□ -1.33
CDK12-202ENST00000447079 ZNF701M0R085 212 aaPredicted RBP6.72□□□□□ -1.33
CDK12-202ENST00000447079 RASAL1O95294 804 aa6.72□□□□□ -1.33
CDK12-202ENST00000447079 PTTG1O95997 202 aa6.72□□□□□ -1.33
CDK12-202ENST00000447079 MT-ND1P03886 318 aa6.72□□□□□ -1.33
CDK12-202ENST00000447079 TYRP1P17643 537 aa6.72□□□□□ -1.33
CDK12-202ENST00000447079 EDNRAP25101 427 aa6.72□□□□□ -1.33
CDK12-202ENST00000447079 ECHS1P30084 290 aa6.72□□□□□ -1.33
CDK12-202ENST00000447079 HTR2BP41595 481 aa6.72□□□□□ -1.33
CDK12-202ENST00000447079 GDF5P43026 501 aa6.72□□□□□ -1.33
CDK12-202ENST00000447079 SOX9P48436 509 aa6.72□□□□□ -1.33
CDK12-202ENST00000447079 PSPHP78330 225 aa6.72□□□□□ -1.33
CDK12-202ENST00000447079 MPP2Q14168 576 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms