RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	PHF21A	Q96BD5	680 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	TESC	Q96BS2	214 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	TRMT61B	Q9BVS5	477 aa	Known RBP	11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	SLC6A16	Q9GZN6	736 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	POLR2J3	Q9H1A7	115 aa	Known RBP	11.93	□□□□□ -0.5
DDR1-238	ENST00000446312		A0A0X1KG70	313 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	CCDC182	A6NF36	153 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	CD8B2	A6NJW9	211 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	HNRNPCL2	B2RXH8	293 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312		H3BSH0	61 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	FFAR1	O14842	300 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	CCL16	O15467	120 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	SLC28A2	O43868	658 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	LEFTY1	O75610	366 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	CD8B	P10966	210 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	NUDT1	P36639	197 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	RECQL	P46063	649 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	INPP1	P49441	399 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	MANF	P55145	182 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	TBPL1	P62380	186 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	SYPL1	Q16563	259 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	HORMAD2	Q8N7B1	307 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	FBLIM1	Q8WUP2	373 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	ING5	Q8WYH8	240 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	EGLN3	Q9H6Z9	239 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	DYRK4	Q9NR20	520 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	SNX7	Q9UNH6	387 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312		A0A1W2PS29	197 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	TRIM77	I1YAP6	450 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	IFNW1	P05000	195 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	IMPA1	P29218	277 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	GPC1	P35052	558 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	AVPR1B	P47901	424 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	SPINT3	P49223	89 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	RPS25	P62851	125 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	LRRC70	Q7Z2Q7	622 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	RNF180	Q86T96	592 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	RASGEF1A	Q8N9B8	481 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	OR4D11	Q8NGI4	311 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	ALG14	Q96F25	216 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	DCLRE1C	Q96SD1	692 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	CNIH4	Q9P003	139 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	HCFC2	Q9Y5Z7	792 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	ZC3H12D	A2A288	527 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	SAGE2P	A6NJ88	616 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	FAM183A	A6NL82	134 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	PRKY	O43930	277 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	PSMA1	P25786	263 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	XK	P51811	444 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	AP2S1	P53680	142 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	CXCR4	P61073	352 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	SNRPD1	P62314	119 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	POLR2G	P62487	172 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	IL18	Q14116	193 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF79	Q15937	498 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	SNAPC1	Q16533	368 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF791	Q3KP31	576 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	ESCO2	Q56NI9	601 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	DDI2	Q5TDH0	399 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	GARNL3	Q5VVW2	1013 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	TMEM150A	Q86TG1	271 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	LURAP1L	Q8IV03	231 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	AMER3	Q8N944	861 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	OR8K3	Q8NH51	312 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	ASZ1	Q8WWH4	475 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	ST6GAL2	Q96JF0	529 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	CXorf36	Q9H7Y0	433 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	POFUT2	Q9Y2G5	429 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	OR51B4	Q9Y5P0	310 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	SCN4A	P35499	1836 aa		11.92	□□□□□ -0.5
DDR1-238	ENST00000446312	PLXNA4	Q9HCM2	1894 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	GRXCR2	A6NFK2	248 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	TEX46	H3BTG2	121 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	YES1	P07947	543 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	ERICH5	Q6P6B1	374 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	CORO6	Q6QEF8	472 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	GAREM2	Q75VX8	874 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	C16orf62	Q7Z3J2	963 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	IQCH	Q86VS3	1027 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	DCAF4L2	Q8NA75	395 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	SOCS4	Q8WXH5	440 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	FATE1	Q969F0	183 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	MARC2	Q969Z3	335 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	LRR1	Q96L50	414 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	UCK2	Q9BZX2	261 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	KCNN2	Q9H2S1	579 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	FAM120C	Q9NX05	1096 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	KCNE2	Q9Y6J6	123 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312		H7C4K7	107 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	CASK	O14936	926 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	NUPL2	O15504	423 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	SEMA7A	O75326	666 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	PTTG1	O95997	202 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	OR12D1	P0DN82	309 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	TIA1	P31483	386 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	SLC6A12	P48065	614 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	SRP54	P61011	504 aa	Known RBP	11.91	□□□□□ -0.5

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