RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ALDH3B1P43353 468 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 CDH11P55287 796 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 NUCB2P80303 420 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 IDI1Q13907 227 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 RBM39Q14498 530 aaKnown RBP3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 KRT81Q14533 505 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 PDK3Q15120 406 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 TRIP10Q15642 601 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 POM121L1PQ3SYA9 428 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 MPPE1Q53F39 396 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 RABGAP1LQ5R372 815 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 RTL6Q6ICC9 239 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 ASPHD2Q6ICH7 369 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR4C11Q6IEV9 310 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 CDC42EP5Q6NZY7 148 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 CBLN3Q6UW01 205 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 TMEM64Q6YI46 380 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 LUZP1Q86V48 1076 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 FAM131BQ86XD5 332 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 KLHDC8BQ8IXV7 354 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 DNAJC22Q8N4W6 341 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 TPD52L3Q96J77 140 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 CFAP53Q96M91 514 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 VPS35Q96QK1 796 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 JPH2Q9BR39 696 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 WRAP53Q9BUR4 548 aaKnown RBP3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 TBC1D10AQ9BXI6 508 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 THAP2Q9H0W7 228 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC26A1Q9H2B4 701 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZNF665Q9H7R5 613 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 VIPAS39Q9H9C1 493 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 SIX2Q9NPC8 291 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 AIPL1Q9NZN9 384 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 ERVK-18Q9QC07 812 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 P2RX2Q9UBL9 471 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 PILRBQ9UKJ0 227 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 SATB2Q9UPW6 733 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 MRPS33Q9Y291 106 aaKnown RBP3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 C2CD2Q9Y426 696 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR1A2Q9Y585 309 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 UMODL1Q5DID0 1318 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 SNAPC4Q5SXM2 1469 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 KIF13AQ9H1H9 1805 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 IGLV9-49A0A0B4J1Y8 123 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 MBLAC1A4D2B0 266 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 RNF222A6NCQ9 220 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 H0YC42 278 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 BLOC1S5-TXNDC5H3BN57 136 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 PRRG1O14668 218 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 FPGTO14772 594 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 MLNRO43193 412 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 EXTL3O43909 919 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 CIDEAO60543 219 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 NADKO95544 446 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 MBD3O95983 291 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 PATE4P0C8F1 98 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 GZMAP12544 262 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 GP9P14770 177 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 CEBPBP17676 345 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 EFNA1P20827 205 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 ACKR3P25106 362 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 AXLP30530 894 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 CHI3L1P36222 383 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 ACADSBP45954 432 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 ACADVLP49748 655 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 RGS4P49798 205 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 CCR4P51679 360 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 LIMK2P53671 638 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 NAPAP54920 295 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 AIF1P55008 147 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 VCPP55072 806 aaKnown RBP3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 ACTR3P61158 418 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 CBX1P83916 185 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 CNTN2Q02246 1040 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 HSPA14Q0VDF9 509 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZSWIM7Q19AV6 140 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZNF311Q5JNZ3 666 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 FAM53AQ6NSI3 398 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC39A4Q6P5W5 647 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 SPATA31D1Q6ZQQ2 1576 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC22A9Q8IVM8 553 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 CCDC197Q8NCU1 140 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR7A2PQ8NGA2 310 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR13C3Q8NGS6 347 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR13C5Q8NGS8 318 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 FAM76AQ8TAV0 307 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 GOLGA5Q8TBA6 731 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 P3H4Q92791 437 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 OSTF1Q92882 214 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC35C1Q96A29 364 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 NXPE2Q96DL1 559 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC41A3Q96GZ6 507 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 NSL1Q96IY1 281 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 LRR1Q96L50 414 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 DEFB118Q96PH6 123 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 F2RL3Q96RI0 385 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 PLIN2Q99541 437 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 RHNO1Q9BSD3 238 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 CCM2Q9BSQ5 444 aa3.91□□□□□ -1.78
HMGB1P48-201ENST00000446155 GON7Q9BXV9 100 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms