RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 STK38LQ9Y2H1 464 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 PCDHA9Q9Y5H5 950 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 ZGRF1Q86YA3 2104 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 SVILO95425 2214 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 TRGV8A0A0C4DH27 118 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 G3V3Y1 287 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 CLPSP04118 112 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 ENO1P06733 434 aaKnown RBP13.66□□□□□ -0.22
USE1-202ENST00000445667 CT62P0C5K7 136 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 HSD3B1P14060 373 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 HSD3B2P26439 372 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 HSF1Q00613 529 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 BTKQ06187 659 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 CSTF3Q12996 717 aaKnown RBP13.66□□□□□ -0.22
USE1-202ENST00000445667 SPRED3Q2MJR0 410 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 KRTCAP3Q53RY4 240 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 PIGGQ5H8A4 983 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 RNF111Q6ZNA4 994 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 PSD4Q8NDX1 1056 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 AENQ8WTP8 325 aaKnown RBP13.66□□□□□ -0.22
USE1-202ENST00000445667 APIPQ96GX9 242 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 ACPTQ9BZG2 426 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 SHCBP1LQ9BZQ2 653 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 CXorf21Q9HAI6 301 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 OXSMQ9NWU1 459 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 SH3BGRL2Q9UJC5 107 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 CES1P1Q9UKY3 287 aa13.66□□□□□ -0.22
USE1-202ENST00000445667 UTP20O75691 2785 aaKnown RBP13.65□□□□□ -0.22
USE1-202ENST00000445667 A0A1B0GUH1 482 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 C1orf226A1L170 272 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 PINLYPA6NC86 204 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 GUCY1B2O75343 617 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 ERAL1O75616 437 aaKnown RBP13.65□□□□□ -0.22
USE1-202ENST00000445667 NADKO95544 446 aaPredicted RBP13.65□□□□□ -0.22
USE1-202ENST00000445667 CLDN1O95832 211 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 NUDT17P0C025 328 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 ZNF24P17028 368 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 SERPINB3P29508 390 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 SSTR4P31391 388 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 GALNSP34059 522 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 PTGER1P34995 402 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 DEKP35659 375 aaKnown RBP13.65□□□□□ -0.22
USE1-202ENST00000445667 FEN1P39748 380 aaKnown RBP13.65□□□□□ -0.22
USE1-202ENST00000445667 ALDH9A1P49189 494 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 SLC37A1P57057 533 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 DNAJB13P59910 316 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 RAE1P78406 368 aaKnown RBP13.65□□□□□ -0.22
USE1-202ENST00000445667 RBPJQ06330 500 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 IFFO1Q0D2I5 559 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 MPEG1Q2M385 716 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 ERCC6LQ2NKX8 1250 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 CFAP157Q5JU67 520 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 FAM180BQ6P0A1 224 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 SLC48A1Q6P1K1 146 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 WDR93Q6P2C0 686 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 OPN5Q6U736 354 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 FRMD7Q6ZUT3 714 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 SLC29A4Q7RTT9 530 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 GPALPP1Q8IXQ4 340 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 GBP7Q8N8V2 638 aaPredicted RBP13.65□□□□□ -0.22
USE1-202ENST00000445667 NUBPLQ8TB37 319 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 RDH11Q8TC12 318 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 RELTQ969Z4 430 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 GAL3ST4Q96RP7 486 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 TNFRSF12AQ9NP84 129 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.65□□□□□ -0.22
USE1-202ENST00000445667 HIVEP3Q5T1R4 2406 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 LRRK2Q5S007 2527 aa13.65□□□□□ -0.22
USE1-202ENST00000445667 POLEQ07864 2286 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 A0A0G2JMM0 328 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 A0A1W2PPB8 328 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 A0A1W2PRS3 328 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 KIR3DP1A8MWS1 328 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 HS6ST1O60243 411 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 SLC19A2O60779 497 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 ZG16O60844 167 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 CPMP14384 443 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 PORP16435 677 aaPredicted RBP13.64□□□□□ -0.23
USE1-202ENST00000445667 NT5EP21589 574 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 COL8A1P27658 744 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 PER3P56645 1201 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 DUSP2Q05923 314 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 ACSM2AQ08AH3 577 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 C3AR1Q16581 482 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 ACSM2BQ68CK6 577 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 EMBQ6PCB8 327 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 RTL4Q6ZR62 310 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 TRABD2AQ86V40 505 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 C10orf107Q8IVU9 208 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 GALNT12Q8IXK2 581 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 ZFP62Q8NB50 900 aaPredicted RBP13.64□□□□□ -0.23
USE1-202ENST00000445667 POGLUT1Q8NBL1 392 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 C16orf52Q8NHV5 167 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 PARD6BQ9BYG5 372 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 WWTR1Q9GZV5 400 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 HEY2Q9UBP5 337 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 MCM8Q9UJA3 840 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 PLLPQ9Y342 182 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 PTPN13Q12923 2485 aa13.64□□□□□ -0.23
USE1-202ENST00000445667 GNG14A0A1W2PPG7 69 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms