RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 EPHA6Q9UF33 1036 aa6.12□□□□□ -1.43
HDAC6-210ENST00000441703 TINAGQ9UJW2 476 aa6.12□□□□□ -1.43
HDAC6-210ENST00000441703 FBXO9Q9UK97 447 aaPredicted RBP6.12□□□□□ -1.43
HDAC6-210ENST00000441703 FBXO5Q9UKT4 447 aa6.12□□□□□ -1.43
HDAC6-210ENST00000441703 BAG5Q9UL15 447 aa6.12□□□□□ -1.43
HDAC6-210ENST00000441703 OAZ3Q9UMX2 235 aa6.12□□□□□ -1.43
HDAC6-210ENST00000441703 PLEKHA6Q9Y2H5 1048 aa6.12□□□□□ -1.43
HDAC6-210ENST00000441703 PTRH2Q9Y3E5 179 aaKnown RBP6.12□□□□□ -1.43
HDAC6-210ENST00000441703 PRKAB1Q9Y478 270 aa6.12□□□□□ -1.43
HDAC6-210ENST00000441703 SPEF1Q9Y4P9 236 aa6.12□□□□□ -1.43
HDAC6-210ENST00000441703 MAP1AP78559 2803 aaPredicted RBP6.12□□□□□ -1.43
HDAC6-210ENST00000441703 STAB1Q9NY15 2570 aa6.12□□□□□ -1.43
HDAC6-210ENST00000441703 COL6A5A8TX70 2615 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 A0A096LPK6 155 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 TCRBV5S2A0A599 114 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 NPIPB15A6NHN6 443 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 HMX3A6NHT5 357 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 ZSCAN5BA6NJL1 495 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 PDZK1P1A8MUH7 402 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 TARM1B6A8C7 271 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 J3KR12 359 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 CCRL2O00421 344 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 EI24O14681 340 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 BET1O15155 118 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 UBDO15205 165 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 METTL18O95568 372 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 LY6G6DO95868 133 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 APOA1P02647 267 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 C2P06681 752 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 CHRNGP07510 517 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 CCDC159P0C7I6 412 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 ATXN8OSP0DMR3 200 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 THRBP10828 461 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 PCNAP12004 261 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 CYP2A7P20853 494 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 IL32P24001 234 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 SHMT2P34897 504 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 RYKP34925 604 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 HTR7P34969 479 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 ALDH3A2P51648 485 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 CLCNKAP51800 687 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 ZNF143P52747 638 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 NKX2-5P52952 324 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 GP2P55259 537 aaKnown RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 DEFA1P59665 94 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 DEFA3P59666 94 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 HSD11B2P80365 405 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 TAGLNQ01995 201 aaKnown RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 PRKCDQ05655 676 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 IL18R1Q13478 541 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 DAG1Q14118 895 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 GPR19Q15760 415 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 TYSND1Q2T9J0 566 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 PTCHD3Q3KNS1 767 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 SYT6Q5T7P8 510 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 NDUFAF5Q5TEU4 345 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 PRAMEF17Q5VTA0 474 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 PRAMEF13Q5VWM6 474 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 IGFL2Q6UWQ7 119 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 LINC00696Q6ZRV3 163 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 PAGE2Q7Z2X7 111 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 R3HCC1LQ7Z5L2 792 aaKnown RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 CAMKMTQ7Z624 323 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 C8orf59Q8N0T1 100 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 EID3Q8N140 333 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 FAM109AQ8N4B1 249 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 PQLC3Q8N755 202 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 EMC1Q8N766 993 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 POC5Q8NA72 575 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 SLC38A9Q8NBW4 561 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 ACBD4Q8NC06 268 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 WFDC11Q8NEX6 87 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 JOSD2Q8TAC2 188 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 HMGCLL1Q8TB92 370 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 FBLIM1Q8WUP2 373 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 CENPIQ92674 756 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 AP2M1Q96CW1 435 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 CXorf40BQ96DE9 158 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 MFSD3Q96ES6 412 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 TSNARE1Q96NA8 513 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 MUS81Q96NY9 551 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 PSKH2Q96QS6 385 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 ZNF300Q96RE9 604 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 COQ7Q99807 217 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 CNPY3Q9BT09 278 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 MCMBPQ9BTE3 642 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 TRAF4Q9BUZ4 470 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 POLDIP3Q9BY77 421 aaKnown RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 MAGEB5Q9BZ81 275 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 NXF2Q9GZY0 626 aaKnown RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 POT1Q9NUX5 634 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 ZNF358Q9NW07 568 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 NSMCE4AQ9NXX6 385 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 USE1Q9NZ43 259 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 WARS2Q9UGM6 360 aaKnown RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 NDOR1Q9UHB4 597 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 OSGIN1Q9UJX0 560 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 PDE10AQ9Y233 779 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 MEMO1Q9Y316 297 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms