RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 QPCTLQ9NXS2 382 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 PSD3Q9NYI0 1048 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 AHSPQ9NZD4 102 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 CPSF2Q9P2I0 782 aaKnown RBP12.48□□□□□ -0.41
GARNL3-206ENST00000439286 TNFRSF10DQ9UBN6 386 aa12.48□□□□□ -0.41
GARNL3-206ENST00000439286 MYO7BQ6PIF6 2116 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 A0A096LPK6 155 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 A0A0G2JNJ9 132 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 C2orf92A0A1B0GVN3 265 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 GLOD5A6NK44 160 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 KLHL2O95198 593 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 CLDN9O95484 217 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 C1QAP02745 245 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 CELA3AP09093 270 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 FBXO45P0C2W1 286 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 SLC35E2P0CK97 266 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 MTHFD2P13995 350 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 CD1EP15812 388 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 KRT15P19012 456 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 PIK3R1P27986 724 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 GALNSP34059 522 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 PEX19P40855 299 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 SERPINB8P50452 374 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 HNRNPH2P55795 449 aaKnown RBP12.47□□□□□ -0.41
GARNL3-206ENST00000439286 NRG3P56975 720 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 TFF3Q07654 80 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 PCBP2Q15366 365 aaKnown RBP eCLIP12.47□□□□□ -0.41
GARNL3-206ENST00000439286 SF3B4Q15427 424 aaKnown RBP eCLIP12.47□□□□□ -0.41
GARNL3-206ENST00000439286 SPRED3Q2MJR0 410 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 METTL2BQ6P1Q9 378 aaKnown RBP12.47□□□□□ -0.41
GARNL3-206ENST00000439286 WDR53Q7Z5U6 358 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-206ENST00000439286 OR10G3Q8NGC4 313 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 DOK4Q8TEW6 326 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 DIO2Q92813 273 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 SERPINI1Q99574 410 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 WWTR1Q9GZV5 400 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 VPS11Q9H270 941 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 DDX31Q9H8H2 851 aaKnown RBP12.47□□□□□ -0.41
GARNL3-206ENST00000439286 ACKR4Q9NPB9 350 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 SNX15Q9NRS6 342 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 Q9UFV3 132 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 EDARQ9UNE0 448 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 ASB4Q9Y574 426 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 IKBKGQ9Y6K9 419 aa12.47□□□□□ -0.41
GARNL3-206ENST00000439286 ABCA12Q86UK0 2595 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 SCN2AQ99250 2005 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 A0A0A6YYD5 115 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 C15orf38-AP3S2A0A0A6YYH1 394 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 A0A1W2PR48 441 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 HSPB2A8KAH6 182 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 HRKO00198 91 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 FOXE1O00358 373 aaPredicted RBP12.46□□□□□ -0.41
GARNL3-206ENST00000439286 EEDO75530 441 aaKnown RBP12.46□□□□□ -0.41
GARNL3-206ENST00000439286 PRKRAO75569 313 aaKnown RBP12.46□□□□□ -0.41
GARNL3-206ENST00000439286 TRAPPC6AO75865 159 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 NADKO95544 446 aaPredicted RBP12.46□□□□□ -0.41
GARNL3-206ENST00000439286 RBP1P09455 135 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 GDF1P27539 372 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 MASP1P48740 699 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 TMED10P49755 219 aaKnown RBP12.46□□□□□ -0.41
GARNL3-206ENST00000439286 NEK2P51955 445 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 CCNG1P51959 295 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 SLC37A1P57057 533 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 IRF9Q00978 393 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 IFT88Q13099 833 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 HSPB2Q16082 182 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 RIPPLY2Q5TAB7 128 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 RTL6Q6ICC9 239 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 OR52E8Q6IFG1 317 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 SPNS3Q6ZMD2 512 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 DGAT2L6Q6ZPD8 337 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 PAGE2Q7Z2X7 111 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 GOLGA7Q7Z5G4 137 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 PACS2Q86VP3 889 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 CENPLQ8N0S6 344 aaPredicted RBP12.46□□□□□ -0.41
GARNL3-206ENST00000439286 OR4K14Q8NGD5 310 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 TP53INP1Q96A56 240 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 ZNF703Q9H7S9 590 aaPredicted RBP12.46□□□□□ -0.41
GARNL3-206ENST00000439286 SH2D2AQ9NP31 389 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 TMCO1Q9UM00 188 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 RNF11Q9Y3C5 154 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 PCDHGB3Q9Y5G1 929 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 FAM215AQ9Y5M1 114 aa12.46□□□□□ -0.41
GARNL3-206ENST00000439286 CSMD1Q96PZ7 3565 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 ANKRD33BA6NCL7 494 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 AHRRA9YTQ3 701 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 SMIM24O75264 130 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 GUCY1B2O75343 617 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 SNX4O95219 450 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 AIFM1O95831 613 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 RFPL3SP0C7P2 107 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 NT5EP21589 574 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 BSGP35613 385 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 TRPC1P48995 793 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 CKAP4Q07065 602 aaKnown RBP12.45□□□□□ -0.42
GARNL3-206ENST00000439286 EBPQ15125 230 aaKnown RBP12.45□□□□□ -0.42
GARNL3-206ENST00000439286 TOMM20Q15388 145 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 NTRK2Q16620 822 aa12.45□□□□□ -0.42
GARNL3-206ENST00000439286 C10orf62Q5T681 223 aaPredicted RBP12.45□□□□□ -0.42
GARNL3-206ENST00000439286 MRM1Q6IN84 353 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms