RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 PLXDC1Q8IUK5 500 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 FBXL8Q96CD0 374 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 VDAC3Q9Y277 283 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 PCDHGA2Q9Y5H1 932 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 ISPDA4D126 451 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 SRRM3A6NNA2 597 aaPredicted RBP9.89□□□□□ -0.83
SHPRH-206ENST00000438092 RAD51DO75771 328 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 NR2C1P13056 603 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 CELP19835 753 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 OXTRP30559 389 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 SOX9P48436 509 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 HADHBP55084 474 aaKnown RBP9.89□□□□□ -0.83
SHPRH-206ENST00000438092 PSMA6P60900 246 aaKnown RBP9.89□□□□□ -0.83
SHPRH-206ENST00000438092 MPP2Q14168 576 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 GBX1Q14549 363 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 ELAVL3Q14576 367 aaKnown RBP9.89□□□□□ -0.83
SHPRH-206ENST00000438092 CNPY1Q3B7I2 92 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 TMEM35AQ53FP2 167 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 CES4AQ5XG92 561 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 DUS1LQ6P1R4 473 aaKnown RBP9.89□□□□□ -0.83
SHPRH-206ENST00000438092 LIPIQ6XZB0 460 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 Q6ZSR6 202 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 HUS1BQ8NHY5 278 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 MAL2Q969L2 176 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 SCGB3A2Q96PL1 93 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 RMI1Q9H9A7 625 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 VSTM2BA6NLU5 285 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 HOXD13P35453 343 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 GJA8P48165 433 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 EMX2Q04743 252 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 NPRL3Q12980 569 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 NCEH1Q6PIU2 408 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 ELMOD2Q8IZ81 293 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 NATD1Q8N6N6 113 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 RAB2BQ8WUD1 216 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 CIDECQ96AQ7 238 aaPredicted RBP9.89□□□□□ -0.83
SHPRH-206ENST00000438092 CPNE2Q96FN4 548 aaPredicted RBP9.89□□□□□ -0.83
SHPRH-206ENST00000438092 FAXDC2Q96IV6 333 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 NAA11Q9BSU3 229 aaPredicted RBP9.89□□□□□ -0.83
SHPRH-206ENST00000438092 TMEM168Q9H0V1 697 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 UNC119BA6NIH7 251 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 MSL3P1P0C860 447 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 RNH1P13489 461 aaKnown RBP9.89□□□□□ -0.83
SHPRH-206ENST00000438092 DEFB103AP81534 67 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 CDKN3Q16667 212 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 CDNFQ49AH0 187 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 SWT1Q5T5J6 900 aaKnown RBP9.89□□□□□ -0.83
SHPRH-206ENST00000438092 OR5M10Q6IEU7 315 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 KLHDC10Q6PID8 442 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 DCDC5Q6ZRR9 648 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 SGCZQ96LD1 299 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 OR5B2Q96R09 309 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 RBM24Q9BX46 236 aaKnown RBP9.89□□□□□ -0.83
SHPRH-206ENST00000438092 ZNF442Q9H7R0 627 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 RPL26L1Q9UNX3 145 aaKnown RBP9.89□□□□□ -0.83
SHPRH-206ENST00000438092 B3GALT1Q9Y5Z6 326 aa9.89□□□□□ -0.83
SHPRH-206ENST00000438092 SGK494L7N484 410 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 ADRB3P13945 408 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 MALLQ13021 153 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 ALG10BQ5I7T1 473 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 ABHD17BQ5VST6 288 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 KANK2Q63ZY3 851 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 VHLLQ6RSH7 139 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 WDR53Q7Z5U6 358 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-206ENST00000438092 SLC22A16Q86VW1 577 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 SIAH1Q8IUQ4 282 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 SLC44A3Q8N4M1 653 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 CNEP1R1Q8N9A8 125 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 GALNT6Q8NCL4 622 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 OR51L1Q8NGJ5 315 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 HIF3AQ9Y2N7 669 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 NEURL4Q96JN8 1562 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 A0A0A6YYH2 397 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 A6NJ64 397 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 OR52A4PA6NMU1 304 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 DISC1C4P0D8 188 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 PIK3C2AO00443 1686 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 F10P00742 488 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 TIMP1P01033 207 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 SLC10A3P09131 477 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 ZNF888P0CJ79 500 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-206ENST00000438092 RORAP35398 523 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 RPS15AP62244 130 aaKnown RBP9.88□□□□□ -0.83
SHPRH-206ENST00000438092 ERV3-1Q14264 604 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 LACTB2Q53H82 288 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-206ENST00000438092 LIPJQ5W064 366 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 KCPQ6ZWJ8 1503 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 ZNF765Q7L2R6 523 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 ENAMQ9NRM1 1142 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 NKX1-2Q9UD57 310 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-206ENST00000438092 ACOT7O00154 380 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 GALNT1Q10472 559 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-206ENST00000438092 SLC10A2Q12908 348 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-206ENST00000438092 FAM76BQ5HYJ3 339 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 C9orf135Q5VTT2 229 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 MTFR2Q6P444 385 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 ALDH16A1Q8IZ83 802 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 RCBTB1Q8NDN9 531 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 FOXN4Q96NZ1 517 aa9.88□□□□□ -0.83
SHPRH-206ENST00000438092 MAF1Q9H063 256 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms