RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CCR8P51685 355 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 RHAGQ02094 409 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 ELAVL3Q14576 367 aaKnown RBP11.19□□□□□ -0.62
CD44-209ENST00000433892 SPHARQ15513 63 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 PAQR6Q6TCH4 344 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 SPATC1Q76KD6 591 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 PSD4Q8NDX1 1056 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 OR5K2Q8NHB8 316 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 XAGE5Q8WWM1 108 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 TMEM80Q96HE8 168 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 PPP1R16AQ96I34 528 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 CEP19Q96LK0 163 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 SLC6A18Q96N87 628 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 ZNF607Q96SK3 696 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 SDHCQ99643 169 aaPredicted RBP11.19□□□□□ -0.62
CD44-209ENST00000433892 ASPNQ9BXN1 380 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 KCNK12Q9HB15 430 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 SLC27A6Q9Y2P4 619 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 MRPS23Q9Y3D9 190 aaKnown RBP11.19□□□□□ -0.62
CD44-209ENST00000433892 REV3LO60673 3130 aa11.19□□□□□ -0.62
CD44-209ENST00000433892 PTPRSQ13332 1948 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 CKAP5Q14008 2032 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 EDDM13A0A1B0GTR0 161 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 HTR3EA5X5Y0 456 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 RGS5O15539 181 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 OXSR1O95747 527 aaPredicted RBP11.18□□□□□ -0.62
CD44-209ENST00000433892 PCCBP05166 539 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 TNFSF8P32971 234 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 CTNNB1P35222 781 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 ETV6P41212 452 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 VEGFBP49765 207 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 LSM11P83369 360 aaKnown RBP eCLIP11.18□□□□□ -0.62
CD44-209ENST00000433892 ZNF91Q05481 1191 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 C12orf73Q69YU5 71 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 ERN2Q76MJ5 926 aaKnown RBP11.18□□□□□ -0.62
CD44-209ENST00000433892 CACUL1Q86Y37 369 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 CXorf40AQ8TE69 158 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 ZBED6CLQ96FA7 236 aaPredicted RBP11.18□□□□□ -0.62
CD44-209ENST00000433892 TRMT61AQ96FX7 289 aaKnown RBP11.18□□□□□ -0.62
CD44-209ENST00000433892 DHRS1Q96LJ7 313 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 SLC30A2Q9BRI3 323 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 BARHL1Q9BZE3 327 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 TVP23BQ9NYZ1 205 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 PCDHGA4Q9Y5G9 962 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 NUMA1Q14980 2115 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 PDZK1P1A8MUH7 402 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 HEPACAM2A8MVW5 462 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 NDUFS4O43181 175 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 HOXC11O43248 304 aaPredicted RBP11.18□□□□□ -0.62
CD44-209ENST00000433892 TLX2O43763 284 aaPredicted RBP11.18□□□□□ -0.62
CD44-209ENST00000433892 LCMT2O60294 686 aaKnown RBP11.18□□□□□ -0.62
CD44-209ENST00000433892 UGT2B17O75795 530 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 CYP7B1O75881 506 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 STATHP02808 62 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 HBQ1P09105 142 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 ERGP11308 486 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 CD72P21854 359 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 CXCR2P25025 360 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 FRKP42685 505 aaPredicted RBP11.18□□□□□ -0.62
CD44-209ENST00000433892 TGM4P49221 684 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 NKX2-5P52952 324 aaPredicted RBP11.18□□□□□ -0.62
CD44-209ENST00000433892 HTRA4P83105 476 aaPredicted RBP11.18□□□□□ -0.62
CD44-209ENST00000433892 ZNF234Q14588 700 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 PODNL1Q6PEZ8 512 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 FAM92BQ6ZTR7 304 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 ADCK2Q7Z695 626 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 UBE3DQ7Z6J8 389 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 NUDT13Q86X67 352 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 ETFBKMTQ8IXQ9 262 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 CELF2-AS1Q8N7Q2 184 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 OR8J1Q8NGP2 316 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 TEFMQ96QE5 360 aaKnown RBP11.18□□□□□ -0.62
CD44-209ENST00000433892 MENTQ9BUN1 341 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 TSSK6Q9BXA6 273 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 OR51I1Q9H343 314 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 PELI2Q9HAT8 420 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 WASH6PQ9NQA3 447 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 CTPS2Q9NRF8 586 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 TRPC4Q9UBN4 977 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 NDOR1Q9UHB4 597 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 A4GNTQ9UNA3 340 aa11.18□□□□□ -0.62
CD44-209ENST00000433892 RPL36Q9Y3U8 105 aaKnown RBP11.18□□□□□ -0.62
CD44-209ENST00000433892 KIF26AQ9ULI4 1882 aaPredicted RBP11.17□□□□□ -0.62
CD44-209ENST00000433892 A0A1W2PPV9 198 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 GLOD5A6NK44 160 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 PRKYO43930 277 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 TBX19O60806 448 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 NME6O75414 186 aaPredicted RBP11.17□□□□□ -0.62
CD44-209ENST00000433892 PRKRAO75569 313 aaKnown RBP11.17□□□□□ -0.62
CD44-209ENST00000433892 NR2F1P10589 423 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 PSMA1P25786 263 aaKnown RBP11.17□□□□□ -0.62
CD44-209ENST00000433892 GPC1P35052 558 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 P2RY2P41231 377 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 CRYBB2P43320 205 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 PRKAG1P54619 331 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 DEFA1P59665 94 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 DEFA3P59666 94 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 RPA4Q13156 261 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 NCF4Q15080 339 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 LRIT3Q3SXY7 679 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms