RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 OR14I1A6ND48 311 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 FIGNL2A6NMB9 653 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 BCKDKO14874 412 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 GPR75O95800 540 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 FAM58BPP0C7Q3 252 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 MAN2A2P49641 1150 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 SPRED3Q2MJR0 410 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 SLC22A10Q63ZE4 541 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 ADGRD1Q6QNK2 874 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 LYPD8Q6UX82 237 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 ACAD11Q709F0 780 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 NUDT13Q86X67 352 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 PTGR2Q8N8N7 351 aaPredicted RBP15.75■□□□□ 0.11
TRIM39-209ENST00000428728 ACBD4Q8NC06 268 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 OR10Q1Q8NGQ4 319 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 LILRB4Q8NHJ6 448 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 UCN3Q969E3 161 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 ATP6V1E2Q96A05 226 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 PHF21BQ96EK2 531 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 GPR78Q96P69 363 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 WWTR1Q9GZV5 400 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 NOL11Q9H8H0 719 aaKnown RBP15.75■□□□□ 0.11
TRIM39-209ENST00000428728 WDR41Q9HAD4 459 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 TNPO3Q9Y5L0 923 aaKnown RBP15.75■□□□□ 0.11
TRIM39-209ENST00000428728 OTOGQ6ZRI0 2925 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 ADGRG4Q8IZF6 3080 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 A0A1W2PS29 197 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 ACSL3O95573 720 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 CCNG1P51959 295 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 ARFIP1P53367 373 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 TFF3Q07654 80 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 BIKQ13323 160 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 CUL3Q13618 768 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 EBPQ15125 230 aaKnown RBP15.74■□□□□ 0.11
TRIM39-209ENST00000428728 FBXW8Q8N3Y1 598 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 L3MBTL4Q8NA19 623 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 OR10G3Q8NGC4 313 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 OR52B6Q8NGF0 335 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 WDR20Q8TBZ3 569 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 PAQR8Q8TEZ7 354 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 RIT1Q92963 219 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 JSRP1Q96MG2 331 aaPredicted RBP15.74■□□□□ 0.11
TRIM39-209ENST00000428728 ACSS3Q9H6R3 686 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 ZNF703Q9H7S9 590 aaPredicted RBP15.74■□□□□ 0.11
TRIM39-209ENST00000428728 DDX31Q9H8H2 851 aaKnown RBP15.74■□□□□ 0.11
TRIM39-209ENST00000428728 MCCC2Q9HCC0 563 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 SH2D2AQ9NP31 389 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 KCNJ16Q9NPI9 418 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 TEX10Q9NXF1 929 aaPredicted RBP15.74■□□□□ 0.11
TRIM39-209ENST00000428728 ACAD8Q9UKU7 415 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 BOKQ9UMX3 212 aaPredicted RBP15.74■□□□□ 0.11
TRIM39-209ENST00000428728 FAM215AQ9Y5M1 114 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 POLQO75417 2590 aa15.74■□□□□ 0.11
TRIM39-209ENST00000428728 F8P00451 2351 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 TEP1Q99973 2627 aaKnown RBP15.73■□□□□ 0.11
TRIM39-209ENST00000428728 TRGV5A0A0B4J1U4 118 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 AQP7O14520 342 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 OR7A17O14581 309 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 TOXO94900 526 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 CLDN9O95484 217 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 INHBAP08476 426 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 ENDOUP21128 410 aaKnown RBP15.73■□□□□ 0.11
TRIM39-209ENST00000428728 MSX1P28360 303 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 SSTR4P31391 388 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 SLC37A1P57057 533 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 SLC10A1Q14973 349 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 HYAL4Q2M3T9 481 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 OR52E8Q6IFG1 317 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 B3GNT6Q6ZMB0 384 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 CDH24Q86UP0 819 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 SLC15A4Q8N697 577 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 NSUN5Q96P11 429 aaKnown RBP15.73■□□□□ 0.11
TRIM39-209ENST00000428728 TREX2Q9BQ50 279 aaPredicted RBP15.73■□□□□ 0.11
TRIM39-209ENST00000428728 TTYH2Q9BSA4 534 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 SLC6A15Q9H2J7 730 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 CDC42EP4Q9H3Q1 356 aaKnown RBP15.73■□□□□ 0.11
TRIM39-209ENST00000428728 SPRR3Q9UBC9 169 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 XPR1Q9UBH6 696 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 MTRF1LQ9UGC7 380 aaKnown RBP15.73■□□□□ 0.11
TRIM39-209ENST00000428728 CHCHD2Q9Y6H1 151 aaPredicted RBP15.73■□□□□ 0.11
TRIM39-209ENST00000428728 KIAA1549Q9HCM3 1950 aa15.73■□□□□ 0.11
TRIM39-209ENST00000428728 A0A1B0GVC2 190 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 LRRC3CA6NJW4 275 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 FOXE1O00358 373 aaPredicted RBP15.72■□□□□ 0.11
TRIM39-209ENST00000428728 SUSD5O60279 629 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 URI1O94763 535 aaPredicted RBP15.72■□□□□ 0.11
TRIM39-209ENST00000428728 CLPSP04118 112 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 FBXO45P0C2W1 286 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 RFPL3SP0C7P2 107 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 IGFBP2P18065 325 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 PIK3R1P27986 724 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 SERPINB3P29508 390 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 C1orf185Q5T7R7 199 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 WLSQ5T9L3 541 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 TTC19Q6DKK2 380 aaPredicted RBP15.72■□□□□ 0.11
TRIM39-209ENST00000428728 RTL6Q6ICC9 239 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 TMEM64Q6YI46 380 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 RPS27LQ71UM5 84 aaKnown RBP15.72■□□□□ 0.11
TRIM39-209ENST00000428728 SLC44A1Q8WWI5 657 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 SARAFQ96BY9 339 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms