RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 MS4A12Q9NXJ0 267 aa14.3□□□□□ -0.12
SEC13-210ENST00000428626 NINJ2Q9NZG7 142 aa14.3□□□□□ -0.12
SEC13-210ENST00000428626 ADGRE2Q9UHX3 823 aa14.3□□□□□ -0.12
SEC13-210ENST00000428626 PHF11Q9UIL8 331 aa14.3□□□□□ -0.12
SEC13-210ENST00000428626 ANGPTL3Q9Y5C1 460 aa14.3□□□□□ -0.12
SEC13-210ENST00000428626 PCDHGA11Q9Y5H2 935 aa14.3□□□□□ -0.12
SEC13-210ENST00000428626 CHCHD2Q9Y6H1 151 aaPredicted RBP14.3□□□□□ -0.12
SEC13-210ENST00000428626 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.3□□□□□ -0.12
SEC13-210ENST00000428626 SETD2Q9BYW2 2564 aaPredicted RBP14.29□□□□□ -0.12
SEC13-210ENST00000428626 A0A0G2JNJ9 132 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 A0A1B0GTL3 188 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 OR14I1A6ND48 311 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 SYCE1LA8MT33 242 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 AQP7O14520 342 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 OR7A17O14581 309 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 PGRMC2O15173 223 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 GPR75O95800 540 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 FBXO45P0C2W1 286 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 CT62P0C5K7 136 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 FAM58BPP0C7Q3 252 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 ACAP2Q15057 778 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 EBPQ15125 230 aaKnown RBP14.29□□□□□ -0.12
SEC13-210ENST00000428626 FAM83EQ2M2I3 478 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 SPRED3Q2MJR0 410 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 TECRLQ5HYJ1 363 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 SLC22A10Q63ZE4 541 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 CDH24Q86UP0 819 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 DMRTC2Q8IXT2 367 aaPredicted RBP14.29□□□□□ -0.12
SEC13-210ENST00000428626 ZNF441Q8N8Z8 693 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 OR52B6Q8NGF0 335 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 NSUN5Q96P11 429 aaKnown RBP14.29□□□□□ -0.12
SEC13-210ENST00000428626 GAL3ST4Q96RP7 486 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 WWTR1Q9GZV5 400 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 ZNF703Q9H7S9 590 aaPredicted RBP14.29□□□□□ -0.12
SEC13-210ENST00000428626 IPPKQ9H8X2 491 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 TEX10Q9NXF1 929 aaPredicted RBP14.29□□□□□ -0.12
SEC13-210ENST00000428626 CPSF2Q9P2I0 782 aaKnown RBP14.29□□□□□ -0.12
SEC13-210ENST00000428626 Q9UFV3 132 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 CNOT11Q9UKZ1 510 aaKnown RBP14.29□□□□□ -0.12
SEC13-210ENST00000428626 MED12Q93074 2177 aa14.29□□□□□ -0.12
SEC13-210ENST00000428626 KDM4EB2RXH2 506 aaPredicted RBP14.28□□□□□ -0.12
SEC13-210ENST00000428626 BCKDKO14874 412 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 SUSD5O60279 629 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 UGDHO60701 494 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 NR2F6P10588 404 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 PTX3P26022 381 aaPredicted RBP14.28□□□□□ -0.12
SEC13-210ENST00000428626 SSTR4P31391 388 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 MAN2A2P49641 1150 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 ARFIP1P53367 373 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 DLX5P56178 289 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 CUL3Q13618 768 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 SLC10A1Q14973 349 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 UAP1Q16222 522 aaPredicted RBP14.28□□□□□ -0.12
SEC13-210ENST00000428626 ARHGAP21Q5T5U3 1957 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 ACAD11Q709F0 780 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 RPS27LQ71UM5 84 aaKnown RBP14.28□□□□□ -0.12
SEC13-210ENST00000428626 FBXW8Q8N3Y1 598 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 SLC22A8Q8TCC7 542 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 SLC6A15Q9H2J7 730 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 NOL11Q9H8H0 719 aaKnown RBP14.28□□□□□ -0.12
SEC13-210ENST00000428626 ZBTB26Q9HCK0 441 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 KCNJ16Q9NPI9 418 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 LYARQ9NX58 379 aaKnown RBP14.28□□□□□ -0.12
SEC13-210ENST00000428626 ZFHX3Q15911 3703 aa14.28□□□□□ -0.12
SEC13-210ENST00000428626 EXPH5Q8NEV8 1989 aa14.27□□□□□ -0.12
SEC13-210ENST00000428626 TRGV5A0A0B4J1U4 118 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 HOXD4P09016 255 aaPredicted RBP14.27□□□□□ -0.13
SEC13-210ENST00000428626 CAPN3P20807 821 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 TYK2P29597 1187 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 TLX1P31314 330 aaPredicted RBP14.27□□□□□ -0.13
SEC13-210ENST00000428626 BUD31P41223 144 aaPredicted RBP14.27□□□□□ -0.13
SEC13-210ENST00000428626 MAGEA12P43365 314 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 KCNJ2P63252 427 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 TRAF3Q13114 568 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 BICRALQ6AI39 1079 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 B3GNT6Q6ZMB0 384 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 RNF111Q6ZNA4 994 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 SEM1Q6ZVN7 128 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 CCDC91Q7Z6B0 441 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 LRRC25Q8N386 305 aaPredicted RBP14.27□□□□□ -0.13
SEC13-210ENST00000428626 SLC15A4Q8N697 577 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 PTGR2Q8N8N7 351 aaPredicted RBP14.27□□□□□ -0.13
SEC13-210ENST00000428626 FAM13CQ8NE31 585 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 OR10Q1Q8NGQ4 319 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 RIT1Q92963 219 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 PHF21BQ96EK2 531 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 ART5Q96L15 291 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 CENPKQ9BS16 269 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 VPS11Q9H270 941 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 ACSS3Q9H6R3 686 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 CXorf21Q9HAI6 301 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 ZFP64Q9NPA5 681 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 PSD3Q9NYI0 1048 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 ACAD8Q9UKU7 415 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 KIAA1549Q9HCM3 1950 aa14.27□□□□□ -0.13
SEC13-210ENST00000428626 ANKHD1Q8IWZ3 2542 aaKnown RBP14.26□□□□□ -0.13
SEC13-210ENST00000428626 IQANK1A0A1B0GTG1 560 aa14.26□□□□□ -0.13
SEC13-210ENST00000428626 CCDC189A1A4V9 331 aa14.26□□□□□ -0.13
SEC13-210ENST00000428626 FIGNL2A6NMB9 653 aa14.26□□□□□ -0.13
SEC13-210ENST00000428626 FOXE1O00358 373 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms