RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 SPARCP09486 303 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 TNFRSF1BP20333 461 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 PROZP22891 400 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 CDNFQ49AH0 187 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 CMPK2Q5EBM0 449 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 CES4AQ5XG92 561 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 COMTD1Q86VU5 262 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 GID4Q8IVV7 300 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 CMTM8Q8IZV2 173 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 ACSL6Q9UKU0 697 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 CNOT11Q9UKZ1 510 aaKnown RBP13.87□□□□□ -0.19
PTPRU-204ENST00000428026 KCNK6Q9Y257 313 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 CREBL2O60519 120 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-204ENST00000428026 MMP20O60882 483 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 UQCRC2P22695 453 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 LEPRP48357 1165 aaKnown RBP13.87□□□□□ -0.19
PTPRU-204ENST00000428026 HERV-K104P61576 105 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 LRRTM4Q86VH4 590 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 GATA6Q92908 595 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 SLC25A44Q96H78 314 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-204ENST00000428026 DPYSL5Q9BPU6 564 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 MCCC2Q9HCC0 563 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 Q9N2J8 555 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 PCDHGB2Q9Y5G2 931 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 A0A1W2PQL4 384 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-204ENST00000428026 OAS1P00973 400 aaKnown RBP13.87□□□□□ -0.19
PTPRU-204ENST00000428026 CA3P07451 260 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 CDK4P11802 303 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 AGXTP21549 392 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 GLP1RP43220 463 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 ETV4P43268 484 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 SOX4Q06945 474 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-204ENST00000428026 ZNF616Q08AN1 781 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 FADDQ13158 208 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 OR2T33Q8NG76 320 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 OR52B6Q8NGF0 335 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 OR4K3Q96R72 315 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 EPYCQ99645 322 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 MARCH4Q9P2E8 410 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-204ENST00000428026 CENPBD1B2RD01 187 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 C11orf98E9PRG8 122 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 IL3P08700 152 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 OR8J1Q8NGP2 316 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 ITPKCQ96DU7 683 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 GJD2Q9UKL4 321 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 DNAJC15Q9Y5T4 150 aa13.87□□□□□ -0.19
PTPRU-204ENST00000428026 TRIM64A6NGJ6 449 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 ITGBL1O95965 494 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-204ENST00000428026 SSTR4P31391 388 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 TPRG1Q6ZUI0 275 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 GATSQ8NAP1 163 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 WDR20Q8TBZ3 569 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 ZFP90Q8TF47 636 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 ORAI3Q9BRQ5 295 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 POLDIP3Q9BY77 421 aaKnown RBP13.86□□□□□ -0.19
PTPRU-204ENST00000428026 FOLH1BQ9HBA9 442 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 CRTAC1Q9NQ79 661 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 PCDHGA7Q9Y5G6 932 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 MEIS3P2A8K0S8 358 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 IFNA2P01563 188 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 HOXD8P13378 290 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-204ENST00000428026 RAB6CQ53S08 254 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 LCN8Q6JVE9 175 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 HS3ST5Q8IZT8 346 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 ANKRD60Q9BZ19 345 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 RAB6CQ9H0N0 254 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 ZNF701Q9NV72 531 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-204ENST00000428026 MKS1Q9NXB0 559 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 ATPIF1Q9UII2 106 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 C4AP0C0L4 1744 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 HMX3A6NHT5 357 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 H7BY64 318 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 PIRO00625 290 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 PRAMEF11O60813 436 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 CYP17A1P05093 508 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 GKN3PP0CG01 181 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 GGT1P19440 569 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 GCGRP47871 477 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 ZXDBP98169 803 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 SIX1Q15475 284 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-204ENST00000428026 ZFAND4Q86XD8 727 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.86□□□□□ -0.19
PTPRU-204ENST00000428026 TBC1D15Q8TC07 691 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 RIT1Q92963 219 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 MRGPRX2Q96LB1 330 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 PRAP1Q96NZ9 151 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 GPR52Q9Y2T5 361 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 HSPA12AO43301 675 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 KDELR3O43731 214 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 CTBP2P56545 445 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 OR4D1Q15615 310 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 GLT8D1Q68CQ7 371 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 OR10T2Q8NGX3 314 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 SAMD11Q96NU1 681 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 TSGA13Q96PP4 275 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 IL12RB2Q99665 862 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 HERPUD2Q9BSE4 406 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 POPDC3Q9HBV1 291 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 CPNE5Q9HCH3 593 aa13.86□□□□□ -0.19
PTPRU-204ENST00000428026 TEX13CA0A0J9YWL9 993 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms