RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 SGCZQ96LD1 299 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 GPR137Q96N19 417 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 HBEGFQ99075 208 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 TMEM109Q9BVC6 243 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 FAIM2Q9BWQ8 316 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 ACPTQ9BZG2 426 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 IQCGQ9H095 443 aaKnown RBP17.12■□□□□ 0.33
MSH5-207ENST00000425703 CXorf21Q9HAI6 301 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 MID1IP1Q9NPA3 183 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 SIRT5Q9NXA8 310 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 CES1P1Q9UKY3 287 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 PSME2Q9UL46 239 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 ERVK-11Q9UQG0 969 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 PLLPQ9Y342 182 aa17.12■□□□□ 0.33
MSH5-207ENST00000425703 GOLGA6L10A6NI86 522 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 OR6B1O95007 311 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 CPMP14384 443 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 ZNF24P17028 368 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 SOX3P41225 446 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 XKP51811 444 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 SLC37A1P57057 533 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 RBPJQ06330 500 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 ZNF267Q14586 743 aaPredicted RBP17.11■□□□□ 0.33
MSH5-207ENST00000425703 PIGGQ5H8A4 983 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 LIPMQ5VYY2 423 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 BNC2Q6ZN30 1099 aaPredicted RBP17.11■□□□□ 0.33
MSH5-207ENST00000425703 RNF111Q6ZNA4 994 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 C16orf47Q6ZP98 133 aaPredicted RBP17.11■□□□□ 0.33
MSH5-207ENST00000425703 MDGA2Q7Z553 956 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 SULF2Q8IWU5 870 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 HOMEZQ8IX15 550 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 GALNT12Q8IXK2 581 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 DND1Q8IYX4 353 aaKnown RBP17.11■□□□□ 0.33
MSH5-207ENST00000425703 BANPQ8N9N5 519 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 CCDC63Q8NA47 563 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 GOLM1Q8NBJ4 401 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 PSD4Q8NDX1 1056 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 UCN3Q969E3 161 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 RELTQ969Z4 430 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 C11orf24Q96F05 449 aaPredicted RBP17.11■□□□□ 0.33
MSH5-207ENST00000425703 APOPT1Q96IL0 206 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 CNPPD1Q9BV87 410 aa17.11■□□□□ 0.33
MSH5-207ENST00000425703 LIN28AQ9H9Z2 209 aaKnown RBP17.11■□□□□ 0.33
MSH5-207ENST00000425703 HRKO00198 91 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 LRRTM2O43300 516 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 PEX1O43933 1283 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 TUBBP07437 444 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 GP1BBP13224 206 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 PORP16435 677 aaPredicted RBP17.1■□□□□ 0.33
MSH5-207ENST00000425703 GSTM5P46439 218 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 HTR6P50406 440 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 PER3P56645 1201 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 KCNK10P57789 538 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 ERVK-8P63133 956 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 ACSM2AQ08AH3 577 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 FUT7Q11130 342 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 ASPHQ12797 758 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 ERCC6LQ2NKX8 1250 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 ACSM2BQ68CK6 577 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 RTL4Q6ZR62 310 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 SLC29A4Q7RTT9 530 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 CPSF7Q8N684 471 aaKnown RBP17.1■□□□□ 0.33
MSH5-207ENST00000425703 ZFP62Q8NB50 900 aaPredicted RBP17.1■□□□□ 0.33
MSH5-207ENST00000425703 C16orf52Q8NHV5 167 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 SLC22A8Q8TCC7 542 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 KCNA7Q96RP8 456 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 TRMOQ9BU70 441 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 PARD6BQ9BYG5 372 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 ERVK-19Q9WJR5 959 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 TIMM22Q9Y584 194 aa17.1■□□□□ 0.33
MSH5-207ENST00000425703 ATP1B1P05026 303 aa17.09■□□□□ 0.33
MSH5-207ENST00000425703 DRD2P14416 443 aa17.09■□□□□ 0.33
MSH5-207ENST00000425703 CHN1P15882 459 aa17.09■□□□□ 0.33
MSH5-207ENST00000425703 DEKP35659 375 aaKnown RBP17.09■□□□□ 0.33
MSH5-207ENST00000425703 MEOX1P50221 254 aa17.09■□□□□ 0.33
MSH5-207ENST00000425703 C6orf163Q5TEZ5 329 aa17.09■□□□□ 0.33
MSH5-207ENST00000425703 IL20RBQ6UXL0 311 aa17.09■□□□□ 0.33
MSH5-207ENST00000425703 TRIM46Q7Z4K8 759 aa17.09■□□□□ 0.33
MSH5-207ENST00000425703 OR7G1Q8NGA0 311 aa17.09■□□□□ 0.33
MSH5-207ENST00000425703 SHCBP1LQ9BZQ2 653 aa17.09■□□□□ 0.33
MSH5-207ENST00000425703 WWTR1Q9GZV5 400 aa17.09■□□□□ 0.33
MSH5-207ENST00000425703 C12orf65Q9H3J6 166 aaKnown RBP17.09■□□□□ 0.33
MSH5-207ENST00000425703 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.09■□□□□ 0.33
MSH5-207ENST00000425703 RAB21Q9UL25 225 aa17.09■□□□□ 0.33
MSH5-207ENST00000425703 V9GYY5 206 aaPredicted RBP17.09■□□□□ 0.33
MSH5-207ENST00000425703 NPIPA5E9PKD4 350 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 ASNA1O43681 348 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 PCDH7O60245 1069 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 TRIM13O60858 407 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 CRCPO75575 148 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 CLPSP04118 112 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 RNF224P0DH78 156 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 UROSP10746 265 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 CSNK2A2P19784 350 aaPredicted RBP17.08■□□□□ 0.32
MSH5-207ENST00000425703 FOXA1P55317 472 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 RAE1P78406 368 aaKnown RBP17.08■□□□□ 0.32
MSH5-207ENST00000425703 HMGCS1Q01581 520 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 PCLAFQ15004 111 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 EBPQ15125 230 aaKnown RBP17.08■□□□□ 0.32
MSH5-207ENST00000425703 RNFT1Q5M7Z0 435 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms