RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 MYO5CQ9NQX4 1742 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 FMN1Q68DA7 1419 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 SHANK2Q9UPX8 1470 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 PCF11O94913 1555 aaKnown RBP2.84□□□□□ -1.95
LINC01040-201ENST00000425048 ERICH2A1L162 156 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 MCF2LO15068 1137 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 PRAF2O60831 178 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 SHOX2O60902 331 aaPredicted RBP2.84□□□□□ -1.95
LINC01040-201ENST00000425048 PGM3O95394 542 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 PDGFBP01127 241 aaPredicted RBP2.84□□□□□ -1.95
LINC01040-201ENST00000425048 IGHG3P01860 377 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 OR9G9P0C7N8 305 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 HOXD10P28358 340 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 MC5RP33032 325 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 SLC1A3P43003 542 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 RAB28P51157 221 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 MFAP3P55082 362 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 GSTO1P78417 241 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 OVGP1Q12889 678 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 TMED1Q13445 227 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 PRPF4BQ13523 1007 aaKnown RBP2.84□□□□□ -1.95
LINC01040-201ENST00000425048 TAF7Q15545 349 aaPredicted RBP2.84□□□□□ -1.95
LINC01040-201ENST00000425048 CLPPQ16740 277 aaPredicted RBP2.84□□□□□ -1.95
LINC01040-201ENST00000425048 TPD52L1Q16890 204 aaPredicted RBP2.84□□□□□ -1.95
LINC01040-201ENST00000425048 KBTBD12Q3ZCT8 623 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 BMP2KLQ5H9B9 411 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 CCDC183Q5T5S1 534 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 KIAA1328Q86T90 577 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 TMEM110Q86TL2 294 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 PLA2G4DQ86XP0 818 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 MYOCDQ8IZQ8 938 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 SMYD1Q8NB12 490 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 SPC24Q8NBT2 197 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 KIR2DL5BQ8NHK3 375 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 AFAP1L1Q8TED9 768 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 GANCQ8TET4 914 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 SETD7Q8WTS6 366 aaKnown RBP2.84□□□□□ -1.95
LINC01040-201ENST00000425048 SMPDL3AQ92484 453 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 TAF4BQ92750 862 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 HDAC11Q96DB2 347 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 RMDN2Q96LZ7 410 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 ALS2CR12Q96Q35 445 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 C5orf66Q9H5L9 145 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 NT5DC2Q9H857 520 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 ISG20L2Q9H9L3 353 aaKnown RBP2.84□□□□□ -1.95
LINC01040-201ENST00000425048 BATF3Q9NR55 127 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 ARGLU1Q9NWB6 273 aaPredicted RBP2.84□□□□□ -1.95
LINC01040-201ENST00000425048 HOXC10Q9NYD6 342 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 TMOD3Q9NYL9 352 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 NRBP1Q9UHY1 535 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 RNF24Q9Y225 148 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 ITM2BQ9Y287 266 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 N6AMT1Q9Y5N5 214 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 SNX8Q9Y5X2 465 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 FAM169AQ9Y6X4 670 aa2.84□□□□□ -1.95
LINC01040-201ENST00000425048 ZC3H13Q5T200 1668 aaKnown RBP2.84□□□□□ -1.95
LINC01040-201ENST00000425048 ABCC11Q96J66 1382 aa2.84□□□□□ -1.96
LINC01040-201ENST00000425048 RPAP1Q9BWH6 1393 aaPredicted RBP2.84□□□□□ -1.96
LINC01040-201ENST00000425048 RALGAPBQ86X10 1494 aa2.84□□□□□ -1.96
LINC01040-201ENST00000425048 EHBP1L1Q8N3D4 1523 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 BIVM-ERCC5R4GMW8 1640 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 ADGBQ8N7X0 1667 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 CDC42BPBQ9Y5S2 1711 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 A0A1B0GVG6 124 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 TRBC2A0A5B9 178 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 ZNF724A8MTY0 619 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 ZNF732B4DXR9 585 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 NEDD8-MDP1E9PL57 170 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 PDXKO00764 312 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 E2F6O75461 281 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 ZNF189O75820 626 aaPredicted RBP2.83□□□□□ -1.96
LINC01040-201ENST00000425048 DLATP10515 647 aaKnown RBP2.83□□□□□ -1.96
LINC01040-201ENST00000425048 EEF2P13639 858 aaKnown RBP2.83□□□□□ -1.96
LINC01040-201ENST00000425048 FERP16591 822 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 MX1P20591 662 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 CCZ1BP86790 482 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 CCZ1P86791 482 aaPredicted RBP2.83□□□□□ -1.96
LINC01040-201ENST00000425048 ACTN3Q08043 901 aaPredicted RBP2.83□□□□□ -1.96
LINC01040-201ENST00000425048 TGIF1Q15583 401 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 FAM174BQ3ZCQ3 159 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 CRY2Q49AN0 593 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 SMUG1Q53HV7 270 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 ABRAXAS1Q6UWZ7 409 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC80Q76M96 950 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 MKXQ8IYA7 352 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 APCDD1Q8J025 514 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 CCAR2Q8N163 923 aaKnown RBP2.83□□□□□ -1.96
LINC01040-201ENST00000425048 SLC43A2Q8N370 569 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 TEX19Q8NA77 164 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 POGLUT1Q8NBL1 392 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 CNNM3Q8NE01 707 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 VN1R17PQ8TDU5 208 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 IMMP1LQ96LU5 166 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC114Q96M63 670 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 CFAP53Q96M91 514 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 PRAM1Q96QH2 718 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 VPS18Q9P253 973 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 TUBGCP4Q9UGJ1 667 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 RABL2BQ9UNT1 228 aa2.83□□□□□ -1.96
LINC01040-201ENST00000425048 GPR34Q9UPC5 381 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms