RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 SLC22A14Q9Y267 594 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 PRELID3BQ9Y3B1 194 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 RRN3P2A6NIE6 340 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 HEPACAM2A8MVW5 462 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 M0R233 179 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 SAP18O00422 153 aaKnown RBP10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 PRKYO43930 277 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 GPR32O75388 356 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 SIX6O95475 246 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 CLDN9O95484 217 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 EPORP19235 508 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 F8A1P23610 371 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 STOMP27105 288 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 GRK4P32298 578 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 CSKP41240 450 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 BDKRB1P46663 353 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 SELENOPP49908 381 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 SEC23BQ15437 767 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 RGNQ15493 299 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 COL28A1Q2UY09 1125 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 TTLL9Q3SXZ7 439 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 RPS26P11Q5JNZ5 115 aaPredicted RBP10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 OLIG3Q7RTU3 272 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 TRIM46Q7Z4K8 759 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 PGBD3Q8N328 593 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 NANOGP1Q8N7R0 232 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 WDR48Q8TAF3 677 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 BCL7CQ8WUZ0 217 aaPredicted RBP10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 KIAA1143Q96AT1 154 aaPredicted RBP10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 EID2BQ96D98 161 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 WBP1Q96G27 269 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 MND1Q9BWT6 205 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 GSX2Q9BZM3 304 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 TTYH1Q9H313 450 aaPredicted RBP10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 METTL17Q9H7H0 456 aaPredicted RBP10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 NANSQ9NR45 359 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 GPATCH2Q9NW75 528 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 KCTD5Q9NXV2 234 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 SLC39A1Q9NY26 324 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 ENOPH1Q9UHY7 261 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 PRAMEF4O60810 478 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 STK16O75716 305 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 HLA-DQB1P01920 261 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 OR12D1P0DN82 309 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 RHCEP18577 417 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 CELP19835 753 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 OC90Q02509 493 aaPredicted RBP10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 PCDH1Q08174 1060 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 NUMA1Q14980 2115 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 IER5LQ5T953 404 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 PRAMEF9Q5VWM5 478 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF600Q6ZNG1 722 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ESPNLQ6ZVH7 1005 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 RBFAQ8N0V3 343 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 SYNPOQ8N3V7 929 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 FAM46DQ8NEK8 389 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 MRPS31Q92665 395 aaKnown RBP10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 KCNJ9Q92806 393 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 OTUB1Q96FW1 271 aaPredicted RBP10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ZSWIM3Q96MP5 696 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ZFP3Q96NJ6 502 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 TMEM175Q9BSA9 504 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 GLS2Q9UI32 602 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 FLVCR2Q9UPI3 526 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 BAIAP2Q9UQB8 552 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 TEX13CA0A0J9YWL9 993 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 QSOX1O00391 747 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 SCN2BO60939 215 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 FGF18O76093 207 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 IGLV3-25P01717 112 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 TRBC1P01850 177 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ANXA3P12429 323 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ITGB7P26010 798 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 TTPAP49638 278 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 EVX1P49640 407 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 NTRK2Q16620 822 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 UBXN11Q5T124 520 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 FAM27D1Q5T7N8 215 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 CXorf57Q6NSI4 855 aaKnown RBP10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 LUZP2Q86TE4 346 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 PM20D2Q8IYS1 436 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 UMODL1-AS1Q8N2C9 162 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF527Q8NB42 609 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 OR4C15Q8NGM1 316 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF707Q96C28 371 aaPredicted RBP10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 DDOQ99489 341 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 C12orf57Q99622 126 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 PKMYT1Q99640 499 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 HTATIP2Q9BUP3 242 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF768Q9H5H4 540 aaKnown RBP10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 FANCFQ9NPI8 374 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ABCC13Q9NSE7 274 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 PCDHB7Q9Y5E2 793 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 NTN1O95631 604 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 IL1AP01583 271 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 LPLP06858 475 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 LPOP22079 712 aaPredicted RBP10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 HOXC13P31276 330 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 OPRD1P41143 372 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms