RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 C1orf232A0A0U1RR37 186 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 PLSCR5A0PG75 271 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 PRSS46E5RG02 174 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 F8W810 466 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 PDLIM1O00151 329 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 SDHDO14521 159 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ARPC1BO15143 372 aaKnown RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 KCNN4O15554 427 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 RNMTO43148 476 aaKnown RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ZSCAN12O43309 604 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 TPST2O60704 377 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 RPS6KA5O75582 802 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 NDUFA7O95182 113 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 IGHV2-70P01814 119 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ERCC1P07992 297 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ACAA1P09110 424 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 UBTFL1P0CB47 393 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 CETPP11597 493 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 CEACAM1P13688 526 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF23P17027 643 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 TPSB2P20231 275 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 IL32P24001 234 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 YWHABP31946 246 aaKnown RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ARRB2P32121 409 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF84P51523 738 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 NR0B1P51843 470 aaKnown RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 NDST1P52848 882 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 RAD23BP54727 409 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 KRTAP10-11P60412 298 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 PSMC5P62195 406 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 E2F1Q01094 437 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 CFHR3Q02985 330 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 MAD2L1Q13257 205 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 GANABQ14697 944 aaKnown RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 CASP8Q14790 479 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 TPSAB1Q15661 275 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 CA9Q16790 459 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 THEM4Q5T1C6 240 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 GPR157Q5UAW9 335 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ALS2CLQ60I27 953 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 WSCD1Q658N2 575 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 HIST2H2BCQ6DN03 193 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 HIST2H2BDQ6DRA6 164 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF770Q6IQ21 691 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 FAM166AQ6J272 317 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 RHBDD2Q6NTF9 364 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 METTL2BQ6P1Q9 378 aaKnown RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 C1orf94Q6P1W5 598 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 RFWD3Q6PCD5 774 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 SLC26A9Q7LBE3 791 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 GPR141Q7Z602 305 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 SNX20Q7Z614 316 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 GLCCI1Q86VQ1 547 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 CCDC50Q8IVM0 306 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 PARP16Q8N5Y8 322 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 PCDH20Q8N6Y1 951 aaKnown RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 PQLC3Q8N755 202 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM217Q8N7C4 229 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 SLC44A5Q8NCS7 719 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 FBXL13Q8NEE6 735 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 PROKR2Q8NFJ6 384 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 OR52N4Q8NGI2 321 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 RHEBL1Q8TAI7 183 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 SCARB1Q8WTV0 552 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 UBTD2Q8WUN7 234 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 LPAR1Q92633 364 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 TANKQ92844 425 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ATOH1Q92858 354 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 PYCR2Q96C36 320 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 CCDC124Q96CT7 223 aaKnown RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 REPS1Q96D71 796 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 RAB39BQ96DA2 213 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 SENP5Q96HI0 755 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 METTL2AQ96IZ6 378 aaKnown RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 GLT1D1Q96MS3 346 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 VSTM2LQ96N03 204 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF582Q96NG8 517 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 TECTBQ96PL2 329 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 SIGLEC11Q96RL6 698 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 C16orf70Q9BSU1 422 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 LMF2Q9BU23 707 aaKnown RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 EFHD1Q9BUP0 239 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 C20orf24Q9BUV8 137 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 RBM24Q9BX46 236 aaKnown RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ANGPTL4Q9BY76 406 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 FRMD8Q9BZ67 464 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 DCLK3Q9C098 648 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 RAB1BQ9H0U4 201 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 GANQ9H2C0 597 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ELOVL6Q9H5J4 265 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 UBTD1Q9HAC8 227 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 RAB9BQ9NP90 201 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 DMAP1Q9NPF5 467 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF275Q9NSD4 429 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ACSS1Q9NUB1 689 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 POT1Q9NUX5 634 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 SPHK1Q9NYA1 384 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ADAM22Q9P0K1 906 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms