RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ATP6V1HQ9UI12 483 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 BLOC1S6Q9UL45 172 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 PSME2Q9UL46 239 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 GPR55Q9Y2T6 319 aaPredicted RBP11.29□□□□□ -0.6
PTPRN-204ENST00000423636 LRIT2A6NDA9 550 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 TMEM247A6NEH6 219 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 KPNA4O00629 521 aaPredicted RBP11.29□□□□□ -0.6
PTPRN-204ENST00000423636 GMFGO60234 142 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 UGT2B11O75310 529 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 IFNW1P05000 195 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 GADD45AP24522 165 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 UBE3AQ05086 875 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 MXD1Q05195 221 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 EIF4HQ15056 248 aaKnown RBP11.29□□□□□ -0.6
PTPRN-204ENST00000423636 IRAK1BP1Q5VVH5 260 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 GPR155Q7Z3F1 870 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 GPR65Q8IYL9 337 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 GGHQ92820 318 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 TPSD1Q9BZJ3 242 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 ZNF556Q9HAH1 456 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 MYNNQ9NPC7 610 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 ACOT13Q9NPJ3 140 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 TUBA8Q9NY65 449 aaPredicted RBP11.29□□□□□ -0.6
PTPRN-204ENST00000423636 ZNF226Q9NYT6 803 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 CNIH4Q9P003 139 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 NDRG4Q9ULP0 352 aaKnown RBP11.29□□□□□ -0.6
PTPRN-204ENST00000423636 CARD8Q9Y2G2 431 aa11.29□□□□□ -0.6
PTPRN-204ENST00000423636 FRYQ5TBA9 3013 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 ALPK3Q96L96 1907 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 CENPVL1A0A0U1RR11 272 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 C5orf67F2Z3F1 127 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 FOXE1O00358 373 aaPredicted RBP11.28□□□□□ -0.6
PTPRN-204ENST00000423636 GNB5O14775 395 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 PRMT3O60678 531 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 CYP7B1O75881 506 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 CPNE6O95741 557 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 HPRP00739 348 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 HNRNPCP07910 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTPRN-204ENST00000423636 SOX3P41225 446 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 KIR2DL1P43626 348 aaPredicted RBP11.28□□□□□ -0.6
PTPRN-204ENST00000423636 PRDX1Q06830 199 aaKnown RBP11.28□□□□□ -0.6
PTPRN-204ENST00000423636 HEPACAMQ14CZ8 416 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 RPE65Q16518 533 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 PTCHD4Q6ZW05 846 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 ADCK1Q86TW2 530 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 ARMC8Q8IUR7 673 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 GHDCQ8N2G8 530 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 ZFP41Q8N8Y5 198 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 RGMAQ96B86 450 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 PLEKHA8Q96JA3 519 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 ZNF514Q96K75 400 aaPredicted RBP11.28□□□□□ -0.6
PTPRN-204ENST00000423636 GPA33Q99795 319 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 ETAA1Q9NY74 926 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 KLHL3Q9UH77 587 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 SLC35F4A4IF30 521 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 SLC16A6O15403 523 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 SEMG1P04279 462 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 RAB28P51157 221 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 VEZF1Q14119 521 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 REEP3Q6NUK4 255 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 LCTLQ6UWM7 567 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 FAM92BQ6ZTR7 304 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 NUDT13Q86X67 352 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 TCEANCQ8N8B7 351 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 B3GNT7Q8NFL0 401 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 OR6T1Q8NGN1 323 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 MUL1Q969V5 352 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 BTBD1Q9H0C5 482 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 RSPH9Q9H1X1 276 aaPredicted RBP11.28□□□□□ -0.6
PTPRN-204ENST00000423636 MED12Q93074 2177 aa11.28□□□□□ -0.6
PTPRN-204ENST00000423636 A0A1W2PQF6 199 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 JRKO75564 520 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 AIFM1O95831 613 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 ZNF888P0CJ79 500 aaPredicted RBP11.27□□□□□ -0.6
PTPRN-204ENST00000423636 ACADMP11310 421 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 HSD3B1P14060 373 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 CHMP24386 653 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 HSD3B2P26439 372 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 ERV3-1Q14264 604 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 PRRT3Q5FWE3 981 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 FRMPD2BQ6IN97 320 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 TCTN3Q6NUS6 607 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 ZNF605Q86T29 641 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 PHOSPHO2Q8TCD6 241 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 SLC7A13Q8TCU3 470 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 SMAP2Q8WU79 429 aaPredicted RBP11.27□□□□□ -0.6
PTPRN-204ENST00000423636 ZFPM2Q8WW38 1151 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 ANGPT4Q9Y264 503 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 PMF1-BGLAPU3KQ54 211 aa11.27□□□□□ -0.6
PTPRN-204ENST00000423636 C17orf113A0A1B0GUU1 675 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 TRIM64CA6NLI5 447 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 CCNB2O95067 398 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 C7P10643 843 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 AGERQ15109 404 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 MICAQ29983 383 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 ADAMTSL4Q6UY14 1074 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 IQCHQ86VS3 1027 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 P2RY8Q86VZ1 359 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 OXR1Q8N573 874 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 OR2L3Q8NG85 312 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms