RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 PPWD1Q96BP3 646 aaKnown RBP9.03□□□□□ -0.96
HERC3-204ENST00000422770 VMP1Q96GC9 406 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 RBM18Q96H35 190 aaKnown RBP9.03□□□□□ -0.96
HERC3-204ENST00000422770 LMF1Q96S06 567 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 CCT8L2Q96SF2 557 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 UTP23Q9BRU9 249 aaKnown RBP9.03□□□□□ -0.96
HERC3-204ENST00000422770 CNPPD1Q9BV87 410 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 EBPLQ9BY08 206 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 ZNF717Q9BY31 904 aaPredicted RBP9.03□□□□□ -0.96
HERC3-204ENST00000422770 DDX31Q9H8H2 851 aaKnown RBP9.03□□□□□ -0.96
HERC3-204ENST00000422770 KLHL1Q9NR64 748 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 TEX10Q9NXF1 929 aaPredicted RBP9.03□□□□□ -0.96
HERC3-204ENST00000422770 KLHL14Q9P2G3 628 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 VPS29Q9UBQ0 182 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 COPS7AQ9UBW8 275 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 VTI1BQ9UEU0 232 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 GIMAP2Q9UG22 337 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 VPS4AQ9UN37 437 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 ZNF462Q96JM2 2506 aa9.03□□□□□ -0.96
HERC3-204ENST00000422770 FLNBO75369 2602 aaKnown RBP9.02□□□□□ -0.96
HERC3-204ENST00000422770 SYNDIG1LA6NDD5 238 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 OR5H15A6NDH6 313 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 E9PBE3 544 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 PROM1O43490 865 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 PCDH7O60245 1069 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 SNX3O60493 162 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 ERAL1O75616 437 aaKnown RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 SORBS2O94875 1100 aaKnown RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 TGDSO95455 350 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 LINC00032P0C843 101 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 HSD3B1P14060 373 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 ALOX15P16050 662 aaPredicted RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 HSD3B2P26439 372 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 TPP2P29144 1249 aaPredicted RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 EPHA3P29320 983 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 ARFIP2P53365 341 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 RPL38P63173 70 aaKnown RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 SLC9B1Q4ZJI4 515 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 SPIN4Q56A73 249 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 NDUFAF5Q5TEU4 345 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 GKAP1Q5VSY0 366 aaPredicted RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 FAM180AQ6UWF9 173 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 Q6ZS92 163 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 RPS19BP1Q86WX3 136 aaKnown RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 TMEM156Q8N614 296 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 GBP7Q8N8V2 638 aaPredicted RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 CCDC197Q8NCU1 140 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 SLC2A12Q8TD20 617 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 UCN3Q969E3 161 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 ANKRD9Q96BM1 317 aaPredicted RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 KLHL29Q96CT2 875 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 MARK4Q96L34 752 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 C5orf34Q96MH7 638 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 RILPQ96NA2 401 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 EBF4Q9BQW3 602 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 SIKE1Q9BRV8 207 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 FAIM2Q9BWQ8 316 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 ACPTQ9BZG2 426 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 WDR55Q9H6Y2 383 aaPredicted RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 LIN28AQ9H9Z2 209 aaKnown RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 PSD3Q9NYI0 1048 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 ADAM29Q9UKF5 820 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 PPT2Q9UMR5 302 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 ERVK-11Q9UQG0 969 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 POLR3HQ9Y535 204 aaPredicted RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 ASB4Q9Y574 426 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 DNAJC15Q9Y5T4 150 aa9.02□□□□□ -0.97
HERC3-204ENST00000422770 COPG1Q9Y678 874 aaKnown RBP9.02□□□□□ -0.97
HERC3-204ENST00000422770 EML6Q6ZMW3 1958 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 TRAV17A0A0B4J275 112 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 ATP6AP2A0A1C7CYW4 349 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 WASHC1A8K0Z3 465 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 PGRMC2O15173 223 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 ATP6AP2O75787 350 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 WISP1O95388 367 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 GPR75O95800 540 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 IL3P08700 152 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 NT5EP21589 574 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 TIA1P31483 386 aaKnown RBP eCLIP9.01□□□□□ -0.97
HERC3-204ENST00000422770 STT3AP46977 705 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 TNFSF10P50591 281 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 ERVK-8P63133 956 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 GABPB1Q06547 395 aaPredicted RBP9.01□□□□□ -0.97
HERC3-204ENST00000422770 ELOAQ14241 798 aaKnown RBP9.01□□□□□ -0.97
HERC3-204ENST00000422770 ZNF267Q14586 743 aaPredicted RBP9.01□□□□□ -0.97
HERC3-204ENST00000422770 TERF2Q15554 542 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 OR1C1Q15619 314 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 GALNTL6Q49A17 601 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 XKR7Q5GH72 579 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 MRM1Q6IN84 353 aaKnown RBP9.01□□□□□ -0.97
HERC3-204ENST00000422770 IGFL2Q6UWQ7 119 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 HSDL2Q6YN16 418 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 MMP21Q8N119 569 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 ZNF321PQ8N8H1 164 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 Q8NA96 180 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 APCDD1LQ8NCL9 501 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 MORN4Q8NDC4 146 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 NFAM1Q8NET5 270 aaPredicted RBP9.01□□□□□ -0.97
HERC3-204ENST00000422770 OR4K14Q8NGD5 310 aa9.01□□□□□ -0.97
HERC3-204ENST00000422770 ELP5Q8TE02 316 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms