RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 PLEK2Q9NYT0 353 aa2.83□□□□□ -1.96
LINC00397-201ENST00000422074 ZNF319Q9P2F9 582 aa2.83□□□□□ -1.96
LINC00397-201ENST00000422074 TEKT2Q9UIF3 430 aa2.83□□□□□ -1.96
LINC00397-201ENST00000422074 EXOC7Q9UPT5 735 aa2.83□□□□□ -1.96
LINC00397-201ENST00000422074 SH3GLB1Q9Y371 365 aa2.83□□□□□ -1.96
LINC00397-201ENST00000422074 SNX5Q9Y5X3 404 aa2.83□□□□□ -1.96
LINC00397-201ENST00000422074 FAM205AQ6ZU69 1335 aa2.83□□□□□ -1.96
LINC00397-201ENST00000422074 TRAV9-2A0A087WT02 112 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 GTPBP10A4D1E9 387 aaKnown RBP2.82□□□□□ -1.96
LINC00397-201ENST00000422074 TRIM64A6NGJ6 449 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 TRIM64BA6NI03 449 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 CHUKO15111 745 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 B4GAT1O43505 415 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 KERAO60938 352 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 PNPP00491 289 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 HLA-DPA1P20036 260 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 CASP3P42574 277 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 TNFRSF4P43489 277 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 MEOX2P50222 304 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 PEX3P56589 373 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 KCNK10P57789 538 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 UBXN1Q04323 297 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 NPRL3Q12980 569 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 GIT2Q14161 759 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 SPHARQ15513 63 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 TRADDQ15628 312 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 ZNF79Q15937 498 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 AARDQ4LEZ3 155 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 MARC1Q5VT66 337 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 Q6ZVH6 145 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 CCDC71Q8IV32 467 aaPredicted RBP2.82□□□□□ -1.96
LINC00397-201ENST00000422074 LAX1Q8IWV1 398 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 ZNF713Q8N859 430 aaPredicted RBP2.82□□□□□ -1.96
LINC00397-201ENST00000422074 NAT8LQ8N9F0 302 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 GPR148Q8TDV2 347 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 GTSF1Q8WW33 167 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 PRCCQ92733 491 aaPredicted RBP2.82□□□□□ -1.96
LINC00397-201ENST00000422074 ATP6V0A1Q93050 837 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 FAM46BQ96A09 425 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 CDHR1Q96JP9 859 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 GUCD1Q96NT3 240 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 TEX13BQ9BXU2 312 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 ACPTQ9BZG2 426 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 PNNQ9H307 717 aaKnown RBP2.82□□□□□ -1.96
LINC00397-201ENST00000422074 ZNF665Q9H7R5 613 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 MAGEF1Q9HAY2 307 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 MID1IP1Q9NPA3 183 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 PRO0461Q9UI25 63 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 MAD2L2Q9UI95 211 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 KCNK6Q9Y257 313 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 EXOC6BQ9Y2D4 811 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 FBXO7Q9Y3I1 522 aa2.82□□□□□ -1.96
LINC00397-201ENST00000422074 TMEM129A0AVI4 362 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 SYCE3A1L190 88 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 H0YIG0 161 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 CCSO14618 274 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 PSMD3O43242 534 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 ATP6V1G1O75348 118 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 EPOP01588 193 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 CHRNGP07510 517 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 FHP07954 510 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 CCDC159P0C7I6 412 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 ODC1P11926 461 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 P4HA1P13674 534 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 ZBTB25P24278 435 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 GJB2P29033 226 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 ATP6V1E1P36543 226 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 GALK2Q01415 458 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 GABPAQ06546 454 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 MFGE8Q08431 387 aaPredicted RBP2.81□□□□□ -1.96
LINC00397-201ENST00000422074 C17orf67Q0P5P2 114 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 RPA4Q13156 261 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 CBX3Q13185 183 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 STXBP2Q15833 593 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 CD164L2Q6UWJ8 174 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 PRSS42Q7Z5A4 293 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 CARNMT1Q8N4J0 409 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 CCDC197Q8NCU1 140 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 TRPV3Q8NET8 790 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 HAS2Q92819 552 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 CABS1Q96KC9 395 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 ERGIC2Q96RQ1 377 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 DDX50Q9BQ39 737 aaKnown RBP2.81□□□□□ -1.96
LINC00397-201ENST00000422074 ACAT2Q9BWD1 397 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 MRPL9Q9BYD2 267 aaKnown RBP2.81□□□□□ -1.96
LINC00397-201ENST00000422074 FAM212BQ9NTI7 297 aaPredicted RBP2.81□□□□□ -1.96
LINC00397-201ENST00000422074 ZCCHC3Q9NUD5 404 aaKnown RBP2.81□□□□□ -1.96
LINC00397-201ENST00000422074 MED17Q9NVC6 651 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 ZNF446Q9NWS9 450 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 ARMCX1Q9P291 453 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 PSORS1C1Q9UIG5 152 aa2.81□□□□□ -1.96
LINC00397-201ENST00000422074 ZNF487B1APH4 448 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 NEDD8-MDP1E9PL57 170 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 DDX39AO00148 427 aaKnown RBP2.8□□□□□ -1.96
LINC00397-201ENST00000422074 KINO60870 393 aaKnown RBP2.8□□□□□ -1.96
LINC00397-201ENST00000422074 HSF2BPO75031 334 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 TSC22D2O75157 780 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 CSDE1O75534 798 aaKnown RBP2.8□□□□□ -1.96
LINC00397-201ENST00000422074 BAG2O95816 211 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 IGHG3P01860 377 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms