RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 POU2F3Q9UKI9 436 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 ENPP4Q9Y6X5 453 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 PLXNB3Q9ULL4 1909 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 OR2A25A4D2G3 310 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 POM121BA6NF01 834 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 BTN3A3O00478 584 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 SSX4O60224 188 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 KIAA0513O60268 411 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 GABARAPO95166 117 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 FGL2Q14314 439 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 CCDC85BQ15834 202 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-213ENST00000421756 INAVAQ3KP66 663 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 FAHD1Q6P587 224 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 ZNF793Q6ZN11 406 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 PDZD3Q86UT5 571 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 SMPDL3AQ92484 453 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 QPCTLQ9NXS2 382 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 EHD3Q9NZN3 535 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 CORO2BQ9UQ03 480 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 PCDHGA2Q9Y5H1 932 aa12.65□□□□□ -0.38
MCF2L-213ENST00000421756 CELSR3Q9NYQ7 3312 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 GSAPA4D1B5 854 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 SLC22A1O15245 554 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 CAPN5O15484 640 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-213ENST00000421756 PRKNO60260 465 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-213ENST00000421756 UGT2B17O75795 530 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 ANXA8P13928 327 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 SSTR4P31391 388 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 DRD3P35462 400 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 PIK3CBP42338 1070 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 TPTEP56180 551 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 SIM1P81133 766 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-213ENST00000421756 CST6Q15828 149 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 C6orf132Q5T0Z8 1188 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 FRMPD2BQ6IN97 320 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 DHRS4L2Q6PKH6 230 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 KIAA1324Q6UXG2 1013 aaKnown RBP12.64□□□□□ -0.39
MCF2L-213ENST00000421756 CYP4Z2PQ8N1L4 340 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 OR9Q1Q8NGQ5 310 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 OR9A2Q8NGT5 310 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 SLC38A4Q969I6 547 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 MRPS30Q9NP92 439 aaKnown RBP12.64□□□□□ -0.39
MCF2L-213ENST00000421756 SPATA7Q9P0W8 599 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 HELZP42694 1942 aaKnown RBP12.64□□□□□ -0.39
MCF2L-213ENST00000421756 TLR4O00206 839 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 HAT1O14929 419 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 DNAJB6O75190 326 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 EML2O95834 649 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 IFNA14P01570 189 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 SRPRAP08240 638 aaKnown RBP12.64□□□□□ -0.39
MCF2L-213ENST00000421756 HSD3B1P14060 373 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 PVRP15151 417 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 DDCP20711 480 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 HSD3B2P26439 372 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 MC3RP41968 323 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 XKP51811 444 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 CRISP1P54107 249 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 TAS2R38P59533 333 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 CBX3Q13185 183 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 MLF2Q15773 248 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-213ENST00000421756 OR2G6Q5TZ20 316 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 TCTN3Q6NUS6 607 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 ENPP7Q6UWV6 458 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 GALNT13Q8IUC8 556 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 PGBD3Q8N328 593 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 OR6T1Q8NGN1 323 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 RHOXF1Q8NHV9 184 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 FGF14Q92915 247 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 SLC35G5Q96KT7 338 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 CHST8Q9H2A9 424 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 GLIPR2Q9H4G4 154 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 SYNPO2LQ9H987 977 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 CLN6Q9NWW5 311 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 PSORS1C1Q9UIG5 152 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 POFUT2Q9Y2G5 429 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 ASXL3Q9C0F0 2248 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 OR2W5A6NFC9 320 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 C4orf51C9J302 202 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 HMGN4O00479 90 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 FHP07954 510 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 ITGA2P17301 1181 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 RUNX3Q13761 415 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 SNAPC1Q16533 368 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 ZNF630Q2M218 657 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-213ENST00000421756 DEFB134Q4QY38 66 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 PARM1Q6UWI2 310 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 NLRP8Q86W28 1048 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 NUDT13Q86X67 352 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 VRK2Q86Y07 508 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 EGFL6Q8IUX8 553 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 KLHDC8AQ8IYD2 350 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 Q8N9G6 341 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-213ENST00000421756 EPYCQ99645 322 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 DKK3Q9UBP4 350 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 ATP6V1HQ9UI12 483 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 HCN2Q9UL51 889 aa12.64□□□□□ -0.39
MCF2L-213ENST00000421756 SERPINI2O75830 405 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 H1F0P07305 194 aaKnown RBP12.63□□□□□ -0.39
MCF2L-213ENST00000421756 IL1RNP18510 177 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 FUT1P19526 365 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms