RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 REV1Q9UBZ9 1251 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 RABL2BQ9UNT1 228 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 CLCA2Q9UQC9 943 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 ANGPT4Q9Y264 503 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 SLC38A8A6NNN8 435 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 TEX46H3BTG2 121 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 SHOXO15266 292 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 HRO43593 1189 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 NME6O75414 186 aaPredicted RBP15.81■□□□□ 0.12
PKP4-204ENST00000421462 RAB36O95755 333 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 IFNA14P01570 189 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 M6PRP20645 277 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 LHCGRP22888 699 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 NNMTP40261 264 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 PER3P56645 1201 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 MAP4K2Q12851 820 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 TIGD3Q6B0B8 471 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 MTFR2Q6P444 385 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 TEX261Q6UWH6 196 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 RNF165Q6ZSG1 346 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 TPGS1Q6ZTW0 290 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 CHMP1BQ7LBR1 199 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 OR11H4Q8NGC9 324 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 DNAJA4Q8WW22 397 aaPredicted RBP15.81■□□□□ 0.12
PKP4-204ENST00000421462 SCAMP4Q969E2 229 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 SENP5Q96HI0 755 aaPredicted RBP15.81■□□□□ 0.12
PKP4-204ENST00000421462 THSD1Q9NS62 852 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 ATP6V1HQ9UI12 483 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 MRPS7Q9Y2R9 242 aaKnown RBP15.81■□□□□ 0.12
PKP4-204ENST00000421462 U3KQ87 197 aa15.81■□□□□ 0.12
PKP4-204ENST00000421462 SEMA7AO75326 666 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 ARHGEF15O94989 841 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 ZNF8P17098 575 aaPredicted RBP15.8■□□□□ 0.12
PKP4-204ENST00000421462 ASMTP46597 345 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 CCSAPQ6IQ19 270 aaPredicted RBP15.8■□□□□ 0.12
PKP4-204ENST00000421462 NEIL3Q8TAT5 605 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 WDR20Q8TBZ3 569 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 ABCG5Q9H222 651 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 SHISA3A0PJX4 238 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 HRGP04196 525 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 KLK1P06870 262 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 PIPP12273 146 aaPredicted RBP15.8■□□□□ 0.12
PKP4-204ENST00000421462 PRPH2P23942 346 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 PTGER1P34995 402 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 ATP6V1E1P36543 226 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 WNT4P56705 351 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 PPP3R1P63098 170 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 MLLT1Q03111 559 aaPredicted RBP15.8■□□□□ 0.12
PKP4-204ENST00000421462 ADGRF1Q5T601 910 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 MEDAGQ5VYS4 303 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 FAM181AQ8N9Y4 354 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 TTC9Q92623 222 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 UFD1Q92890 307 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 RIT1Q92963 219 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 UROC1Q96N76 676 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 TMEM43Q9BTV4 400 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 PRR14Q9BWN1 585 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 PPP1R3EQ9H7J1 279 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 ZDHHC3Q9NYG2 299 aa15.8■□□□□ 0.12
PKP4-204ENST00000421462 HCN1O60741 890 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 LALBAP00709 142 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 C8GP07360 202 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 CXCL3P19876 107 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 ELAVL4P26378 380 aaKnown RBP15.79■□□□□ 0.12
PKP4-204ENST00000421462 GATMP50440 423 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 TEKQ02763 1124 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 ZNF791Q3KP31 576 aaPredicted RBP15.79■□□□□ 0.12
PKP4-204ENST00000421462 SYT14P1Q58G82 188 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 TECPR1Q7Z6L1 1165 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 C1QTNF7Q9BXJ2 289 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 IL20RAQ9UHF4 553 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 COL4A4P53420 1690 aaPredicted RBP15.79■□□□□ 0.12
PKP4-204ENST00000421462 A0A1W2PRB8 838 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 M0R3H8 397 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 PROM1O43490 865 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 RECKO95980 971 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 TIA1P31483 386 aaKnown RBP eCLIP15.79■□□□□ 0.121e-6■■□□□ 13.1
PKP4-204ENST00000421462 DCDC1P59894 354 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 GPR176Q14439 515 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 SUZ12Q15022 739 aaKnown RBP15.79■□□□□ 0.12
PKP4-204ENST00000421462 ZSWIM7Q19AV6 140 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 PRSS53Q2L4Q9 553 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 CLLU1OSQ5K130 101 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 ZNF770Q6IQ21 691 aaPredicted RBP15.79■□□□□ 0.12
PKP4-204ENST00000421462 AGTRAPQ6RW13 159 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 SLC7A13Q8TCU3 470 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 RNFT2Q96EX2 444 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 OR4K3Q96R72 315 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 MCOLN1Q9GZU1 580 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 SAP130Q9H0E3 1048 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 ZC4H2Q9NQZ6 224 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 DIABLOQ9NR28 239 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 NKIRAS2Q9NYR9 191 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 ATP6V1G2-DDX39BF2Z307 99 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 SEPT4O43236 478 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 EEF1E1O43324 174 aaKnown RBP15.79■□□□□ 0.12
PKP4-204ENST00000421462 SLC16A8O95907 504 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 ALDH1A1P00352 501 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 H1F0P07305 194 aaKnown RBP15.79■□□□□ 0.12
PKP4-204ENST00000421462 OR12D1P0DN82 309 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms