RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TMEM178AQ8NBL3 297 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 NUBPLQ8TB37 319 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 SREK1Q8WXA9 508 aaKnown RBP19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 RBM18Q96H35 190 aaKnown RBP19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 C5orf34Q96MH7 638 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 ZNF681Q96N22 645 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 CXorf21Q9HAI6 301 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 SH2D2AQ9NP31 389 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 MID1IP1Q9NPA3 183 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 SLC17A7Q9P2U7 560 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 HEY2Q9UBP5 337 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 MCM8Q9UJA3 840 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 CRYABP02511 175 aaKnown RBP19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 MAPK12P53778 367 aa19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 TRA2BP62995 288 aaKnown RBP19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 ERVK-8P63133 956 aa19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 FUT7Q11130 342 aa19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 DUSP8Q13202 625 aa19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 MPEG1Q2M385 716 aa19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 PIGGQ5H8A4 983 aa19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 LIPMQ5VYY2 423 aa19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 SCIMPQ6UWF3 145 aa19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 TRIM46Q7Z4K8 759 aa19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 CYP4Z2PQ8N1L4 340 aa19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 CPSF7Q8N684 471 aaKnown RBP19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 HORMAD2Q8N7B1 307 aa19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 PELOQ9BRX2 385 aaKnown RBP19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 GATA5Q9BWX5 397 aaPredicted RBP19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 ERVK-19Q9WJR5 959 aa19.09■□□□□ 0.65
PKNOX1-202ENST00000418336 A0A0G2JMM0 328 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 A0A1W2PPB8 328 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 A0A1W2PRS3 328 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 PINLYPA6NC86 204 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 KIR3DP1A8MWS1 328 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 TYROBPO43914 113 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 AGFG2O95081 481 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 CPMP14384 443 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 COX7A2P14406 83 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 SERPINB3P29508 390 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 HMOX2P30519 316 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 ARRB2P32121 409 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 NAA20P61599 178 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 ZNF844Q08AG5 666 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 EBPQ15125 230 aaKnown RBP19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 MAPKAPK3Q16644 382 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 PRSS53Q2L4Q9 553 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 ZNF791Q3KP31 576 aaPredicted RBP19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 TNFAIP8L3Q5GJ75 292 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 FGD2Q7Z6J4 655 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 GPALPP1Q8IXQ4 340 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 ZNF615Q8N8J6 731 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 OR4K14Q8NGD5 310 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 OR6Y1Q8NGX8 325 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 SSC4DQ8WTU2 575 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 WDR41Q9HAD4 459 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 ZNF639Q9UID6 485 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 OSGIN2Q9Y236 505 aa19.08■□□□□ 0.64
PKNOX1-202ENST00000418336 SPTBN1Q01082 2364 aaKnown RBP19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 EML6Q6ZMW3 1958 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 C1orf226A1L170 272 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 NPIPB8E9PQR5 432 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 ALDH3A1P30838 453 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 SSTR4P31391 388 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 ETV4P43268 484 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 XKP51811 444 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 ZNF267Q14586 743 aaPredicted RBP19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 PRICKLE4Q2TBC4 344 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 SRRM1Q8IYB3 904 aaKnown RBP19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 ZFP62Q8NB50 900 aaPredicted RBP19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 OR5L2Q8NGL0 311 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 RIT1Q92963 219 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 CTHRC1Q96CG8 243 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 CNRIP1Q96F85 164 aaPredicted RBP19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 GPR137Q96N19 417 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 TUBB1Q9H4B7 451 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 SLC5A6Q9Y289 635 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 ZNF835Q9Y2P0 537 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 CROCCQ5TZA2 2017 aa19.07■□□□□ 0.64
PKNOX1-202ENST00000418336 PEX1O43933 1283 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 SPAG7O75391 227 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 UNC5CO95185 931 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 ATP1B1P05026 303 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 MEOX1P50221 254 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 NR0B1P51843 470 aaKnown RBP19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 KIAA0040Q15053 153 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 CEBPEQ15744 281 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 C4orf17Q53FE4 359 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 CES4AQ5XG92 561 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 IL20RBQ6UXL0 311 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 RNF165Q6ZSG1 346 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 TMEM156Q8N614 296 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 PSD4Q8NDX1 1056 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 SIMC1Q8NDZ2 872 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 C16orf52Q8NHV5 167 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 TCP10LQ8TDR4 215 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 RELTQ969Z4 430 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 ART5Q96L15 291 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 FAM111AQ96PZ2 611 aa19.06■□□□□ 0.64
PKNOX1-202ENST00000418336 MECRQ9BV79 373 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms