RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 CDH3P22223 829 aa18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 CAPZBP47756 277 aa18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 FNTBP49356 437 aa18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 CSTF1Q05048 431 aaKnown RBP18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 RPS26P11Q5JNZ5 115 aaPredicted RBP18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 ARHGEF39Q8N4T4 335 aa18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 SPPL2AQ8TCT8 520 aa18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 LZICQ8WZA0 190 aa18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 NRBF2Q96F24 287 aa18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 TOR3AQ9H497 397 aa18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 IL21RQ9HBE5 538 aa18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 UCKL1Q9NWZ5 548 aa18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 THUMPD1Q9NXG2 353 aaKnown RBP18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 MS4A12Q9NXJ0 267 aa18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 NDUFAF4Q9P032 175 aa18.11■□□□□ 0.49
RAB3IP-205ENST00000417413 SLC9B1P1A6NJY1 282 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 C5orf58C9J3I9 102 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 BCAT2O15382 392 aaPredicted RBP18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 EMC8O43402 210 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 GALR3O60755 368 aaPredicted RBP18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 H6PDO95479 791 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 LINGO3P0C6S8 592 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 RXRGP48443 463 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 OLR1P78380 273 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 APOFQ13790 326 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 TMEM107Q6UX40 140 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 ARMC8Q8IUR7 673 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 APLFQ8IW19 511 aaPredicted RBP18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 DNAJC22Q8N4W6 341 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 ARL10Q8N8L6 244 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 OR56A1Q8NGH5 318 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 OR9A2Q8NGT5 310 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 MIPOL1Q8TD10 442 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 ELP4Q96EB1 424 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 MAGED4Q96JG8 741 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 RSPO3Q9BXY4 272 aaPredicted RBP18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 THSD1Q9NS62 852 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 CCDC88CQ9P219 2028 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 SCN2AQ99250 2005 aa18.1■□□□□ 0.49
RAB3IP-205ENST00000417413 ZNF860A6NHJ4 632 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 SDC3O75056 442 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 RECKO95980 971 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 CTSBP07858 339 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 FHP07954 510 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 CD247P20963 164 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 KHKP50053 298 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 AFF3P51826 1226 aaKnown RBP18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 C21orf59P57076 290 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 SIM1P81133 766 aaPredicted RBP18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 C14orf28Q4W4Y0 310 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 BHLHB9Q6PI77 547 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 TSSK4Q6SA08 328 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 SZRD1Q7Z422 152 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 MCATQ8IVS2 390 aaKnown RBP18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 SHISA5Q8N114 240 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 METTL25Q8N6Q8 603 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 SMYD1Q8NB12 490 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 DTWD2Q8NBA8 298 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 OR5D16Q8NGK9 328 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 SLC38A3Q99624 504 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 MAP3K3Q99759 626 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 AMBRA1Q9C0C7 1298 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 REEP1Q9H902 201 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 STARD5Q9NSY2 213 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 FAM118AQ9NWS6 357 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 SAMHD1Q9Y3Z3 626 aaKnown RBP18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 ZNF451Q9Y4E5 1061 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 PCDH15Q96QU1 1955 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 HS6ST1O60243 411 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 MFN2O95140 757 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 HMGN2P05204 90 aaKnown RBP18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 GNSP15586 552 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 TLX1P31314 330 aaPredicted RBP18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 CNR2P34972 360 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 OR1E2P47887 323 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 PRKAG1P54619 331 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 EPS8Q12929 822 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 LAPTM4AQ15012 233 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 LTB4RQ15722 352 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 SYPL1Q16563 259 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 DEFB110Q30KQ9 67 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 USP53Q70EK8 1073 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 BMP8AQ7Z5Y6 402 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 CYP4Z1Q86W10 505 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 SLC44A2Q8IWA5 706 aaPredicted RBP18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 OFCC1Q8IZS5 231 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 OR4K14Q8NGD5 310 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 APOBEC4Q8WW27 367 aaKnown RBP18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 GAB3Q8WWW8 586 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 GEMIN6Q8WXD5 167 aaKnown RBP18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 ZNF300Q96RE9 604 aaPredicted RBP18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 EPYCQ99645 322 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 CCDC3Q9BQI4 270 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 MRPS26Q9BYN8 205 aaKnown RBP18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 P2RX2Q9UBL9 471 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 MYRFQ9Y2G1 1151 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 NAALAD2Q9Y3Q0 740 aa18.09■□□□□ 0.49
RAB3IP-205ENST00000417413 TNRC6BQ9UPQ9 1833 aaKnown RBP18.08■□□□□ 0.49
RAB3IP-205ENST00000417413 SLC28A2O43868 658 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms