RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 MAATS1Q7Z4T9 603 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 WDR53Q7Z5U6 358 aaPredicted RBP13.63□□□□□ -0.23
RPS28-201ENST00000417088 MYLK4Q86YV6 388 aaPredicted RBP13.63□□□□□ -0.23
RPS28-201ENST00000417088 DND1Q8IYX4 353 aaKnown RBP13.63□□□□□ -0.23
RPS28-201ENST00000417088 FAM13CQ8NE31 585 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 OR10G3Q8NGC4 313 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 KCTD4Q8WVF5 259 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 GAL3ST4Q96RP7 486 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 PELOQ9BRX2 385 aaKnown RBP13.63□□□□□ -0.23
RPS28-201ENST00000417088 CENPKQ9BS16 269 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 WWTR1Q9GZV5 400 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 SLC6A15Q9H2J7 730 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 GRPEL1Q9HAV7 217 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 QPCTLQ9NXS2 382 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 ASB4Q9Y574 426 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 PCDHGA11Q9Y5H2 935 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 PRRC2AP48634 2157 aaKnown RBP13.63□□□□□ -0.23
RPS28-201ENST00000417088 NINQ8N4C6 2090 aa13.63□□□□□ -0.23
RPS28-201ENST00000417088 A0A0A6YYD5 115 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 A0A1W2PR48 441 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 GLOD5A6NK44 160 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 FAM47E-STBD1D6RA91 191 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 TMPRSS11DO60235 418 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 EEDO75530 441 aaKnown RBP13.62□□□□□ -0.23
RPS28-201ENST00000417088 CTAG2O75638 210 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 CLPSP04118 112 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 PTX3P26022 381 aaPredicted RBP13.62□□□□□ -0.23
RPS28-201ENST00000417088 BSGP35613 385 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 BUD31P41223 144 aaPredicted RBP13.62□□□□□ -0.23
RPS28-201ENST00000417088 TRPC1P48995 793 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 IST1P53990 364 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 SNTB1Q13884 538 aaKnown RBP13.62□□□□□ -0.23
RPS28-201ENST00000417088 SETDB1Q15047 1291 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 LIPJQ5W064 366 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 RNF111Q6ZNA4 994 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 SLC29A4Q7RTT9 530 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 ULK2Q8IYT8 1036 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 CENPLQ8N0S6 344 aaPredicted RBP13.62□□□□□ -0.23
RPS28-201ENST00000417088 SPATA4Q8NEY3 305 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 RHEBL1Q8TAI7 183 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 NEIL3Q8TAT5 605 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 FBF1Q8TES7 1133 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 RIT1Q92963 219 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 UCN3Q969E3 161 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 DDX31Q9H8H2 851 aaKnown RBP13.62□□□□□ -0.23
RPS28-201ENST00000417088 RYDENQ9NUL5 291 aaKnown RBP13.62□□□□□ -0.23
RPS28-201ENST00000417088 LYARQ9NX58 379 aaKnown RBP13.62□□□□□ -0.23
RPS28-201ENST00000417088 DNAJB12Q9NXW2 375 aaKnown RBP13.62□□□□□ -0.23
RPS28-201ENST00000417088 ACOT9Q9Y305 439 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 ANGPTL3Q9Y5C1 460 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 PCDHGB3Q9Y5G1 929 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 NCKAP5O14513 1909 aa13.62□□□□□ -0.23
RPS28-201ENST00000417088 LRRC14BA6NHZ5 514 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 OR6C76A6NM76 312 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 SYCE1LA8MT33 242 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 H0YIV9 168 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 OR10H2O60403 315 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 KRT38O76015 456 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 LRATO95237 230 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 FAM58BPP0C7Q3 252 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 GALNSP34059 522 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 MAGEA4P43358 317 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 PLTPP55058 493 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 IRF9Q00978 393 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 NTRK2Q16620 822 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 PFKFB4Q16877 469 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 TMEM64Q6YI46 380 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 ZZZ3Q8IYH5 903 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 ZNF441Q8N8Z8 693 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 JSRP1Q96MG2 331 aaPredicted RBP13.61□□□□□ -0.23
RPS28-201ENST00000417088 DOHHQ9BU89 302 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 ACTR8Q9H981 624 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 B4GALT7Q9UBV7 327 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 ABCA4P78363 2273 aa13.61□□□□□ -0.23
RPS28-201ENST00000417088 A0A1W2PS29 197 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 ANKRD33BA6NCL7 494 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 HSPB2A8KAH6 182 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 SYT5O00445 386 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 TRIM3O75382 744 aaPredicted RBP13.6□□□□□ -0.23
RPS28-201ENST00000417088 AIFM1O95831 613 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 C2P06681 752 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 SLC35E2P0CK97 266 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 NR2F6P10588 404 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 SSTR4P31391 388 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 STX2P32856 288 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 KIR2DL3P43628 341 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 NEK2P51955 445 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 PHEXP78562 749 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 C2orf54Q08AI8 447 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 NAB1Q13506 487 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 CUL3Q13618 768 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 PCBP2Q15366 365 aaKnown RBP eCLIP13.6□□□□□ -0.23
RPS28-201ENST00000417088 TRADDQ15628 312 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 HSPB2Q16082 182 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 CPSF6Q16630 551 aaKnown RBP eCLIP13.6□□□□□ -0.23
RPS28-201ENST00000417088 CCDC25Q86WR0 208 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 LIX1Q8N485 282 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 RELL2Q8NC24 303 aaPredicted RBP13.6□□□□□ -0.23
RPS28-201ENST00000417088 NAXEQ8NCW5 288 aa13.6□□□□□ -0.23
RPS28-201ENST00000417088 WDR20Q8TBZ3 569 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms