RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 XRN2Q9H0D6 950 aaKnown RBP eCLIP14□□□□□ -0.17
NCKIPSD-204ENST00000416649 LINC00597Q9H2U6 94 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 CSNK1G1Q9HCP0 422 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 ACER3Q9NUN7 267 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 ARL15Q9NXU5 204 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 EXTL2Q9UBQ6 330 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 FTSJ1Q9UET6 329 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 RAB23Q9ULC3 237 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 PCDHB7Q9Y5E2 793 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 GSAPA4D1B5 854 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 C2orf78A6NCI8 922 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 ACSL4O60488 711 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 TRBC1P01850 177 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 PRPS1L1P21108 318 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 CBX5P45973 191 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 SRP9P49458 86 aaKnown RBP14□□□□□ -0.17
NCKIPSD-204ENST00000416649 EVX1P49640 407 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 ATP12AP54707 1039 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 WNT3P56703 355 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 PUDPQ08623 228 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 GAB1Q13480 694 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 ZNF273Q14593 569 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 GPNMBQ14956 572 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 SUSD3Q96L08 255 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 NTMT1Q9BV86 223 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 TRIM62Q9BVG3 475 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 SDHAF2Q9NX18 166 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 RPL36Q9Y3U8 105 aaKnown RBP14□□□□□ -0.17
NCKIPSD-204ENST00000416649 OARD1Q9Y530 152 aa14□□□□□ -0.17
NCKIPSD-204ENST00000416649 GABRR3A8MPY1 467 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 PI15O43692 258 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 SSNA1O43805 119 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 FABP5Q01469 135 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 TWF1Q12792 350 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 COX10Q12887 443 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 UNC5DQ6UXZ4 953 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 FTMTQ8N4E7 242 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 SLAIN1Q8ND83 568 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 NXPE2Q96DL1 559 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 SLC6A18Q96N87 628 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 MTERF1Q99551 399 aaKnown RBP13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 DUSP26Q9BV47 211 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 OR51J1Q9H342 316 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 SLC25A19Q9HC21 320 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 PRDM5Q9NQX1 630 aaPredicted RBP13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 C2orf92A0A1B0GVN3 265 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 hCG_1807616A0A1W2PRN6 198 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 OR10H3O60404 316 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 BDKRB1P46663 353 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 IL20RBQ6UXL0 311 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 RSPO2Q6UXX9 243 aaPredicted RBP13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 ZNF852Q6ZMS4 543 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 C17orf107Q6ZR85 190 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 DDX53Q86TM3 631 aaKnown RBP13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 FAM9CQ8IZT9 166 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 TMEM163Q8TC26 289 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 TRIB3Q96RU7 358 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 TMEM121BQ9BXQ6 578 aaPredicted RBP13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 CHIAQ9BZP6 476 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 SAP130Q9H0E3 1048 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 ACSL6Q9UKU0 697 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 SESN1Q9Y6P5 492 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 GBF1Q92538 1859 aa13.99□□□□□ -0.17
NCKIPSD-204ENST00000416649 WASH4PA8MWX3 477 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 RGS11O94810 467 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 HLA-DQB1P01920 261 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 NR2F6P10588 404 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 PIPP12273 146 aaPredicted RBP13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 SELPP16109 830 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 ITPKAP23677 461 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 SRSF11Q05519 484 aaKnown RBP13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 ADAM15Q13444 863 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 NTRK2Q16620 822 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 ADGRF3Q8IZF5 1079 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 OR2T35Q8NGX2 323 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 HERVK_113Q902F9 699 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 SENP5Q96HI0 755 aaPredicted RBP13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 PIP5K1AQ99755 562 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 ADGRE3Q9BY15 652 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 CUEDC1Q9NWM3 386 aaPredicted RBP13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 SLCO1C1Q9NYB5 712 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 MYO9BQ13459 2157 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 TEX13CA0A0J9YWL9 993 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 M0QZQ0 153 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 RFXAPO00287 272 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 KHNYNO15037 678 aaKnown RBP13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 EEF1E1O43324 174 aaKnown RBP13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 SCN2BO60939 215 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 BPIP17213 487 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 AMD1P17707 334 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 ABRQ12979 859 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 HEPACAMQ14CZ8 416 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 NDUFAF5Q5TEU4 345 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 LRFN4Q6PJG9 635 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 LINGO4Q6UY18 593 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 OR5AK3PQ8NH89 298 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 CHTF18Q8WVB6 975 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 OTULINQ96BN8 352 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 MS4A3Q96HJ5 214 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 FOPNLQ96NB1 174 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms