RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 IL2RAP01589 272 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 CERS1P27544 350 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 GABRB3P28472 473 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 STX2P32856 288 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 PGGT1BP53609 377 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 LIM2P55344 173 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 GPX6P59796 221 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 PPP2R2BQ00005 443 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 ASPHQ12797 758 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 NAB1Q13506 487 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 PPP1R3AQ16821 1122 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 ADPRMQ3LIE5 342 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 HSP90AA5PQ58FG0 334 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 PIGGQ5H8A4 983 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 SLC22A10Q63ZE4 541 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 NSUN5P2Q63ZY6 315 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 SBSNQ6UWP8 590 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 THOC6Q86W42 341 aaKnown RBP8.77□□□□□ -1.01
RFFL-203ENST00000413582 TDRPQ86YL5 185 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 ANKMY2Q8IV38 441 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 P3H2Q8IVL5 708 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 C9orf40Q8IXQ3 194 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 LIX1Q8N485 282 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 C2CD4AQ8NCU7 369 aaPredicted RBP8.77□□□□□ -1.01
RFFL-203ENST00000413582 NUBPLQ8TB37 319 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 ZNF721Q8TF20 911 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 SMPDL3BQ92485 455 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 SPACA9Q96E40 222 aaPredicted RBP8.77□□□□□ -1.01
RFFL-203ENST00000413582 CFAP36Q96G28 342 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 PIP5K1AQ99755 562 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 ALOXE3Q9BYJ1 711 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 PRDM14Q9GZV8 571 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 ZNF446Q9NWS9 450 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 MOCS1Q9NZB8 636 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 IKZF3Q9UKT9 509 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 DAPP1Q9UN19 280 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 CHCHD2Q9Y6H1 151 aaPredicted RBP8.77□□□□□ -1.01
RFFL-203ENST00000413582 RAI1Q7Z5J4 1906 aaPredicted RBP8.77□□□□□ -1.01
RFFL-203ENST00000413582 A0A088AWK7 358 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 MBD3L4A6NDZ8 208 aaPredicted RBP8.76□□□□□ -1.01
RFFL-203ENST00000413582 MBD3L3A6NE82 208 aaPredicted RBP8.76□□□□□ -1.01
RFFL-203ENST00000413582 TRIM64A6NGJ6 449 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 TRIM64BA6NI03 449 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 MBD3L5A6NJ08 208 aaPredicted RBP8.76□□□□□ -1.01
RFFL-203ENST00000413582 CD8B2A6NJW9 211 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 SMPD2O60906 423 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 CTNSO60931 367 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 LRATO95237 230 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 ETHE1O95571 254 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 ACSL3O95573 720 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 ENO2P09104 434 aaPredicted RBP8.76□□□□□ -1.01
RFFL-203ENST00000413582 ZNF10P21506 573 aaPredicted RBP8.76□□□□□ -1.01
RFFL-203ENST00000413582 CTSSP25774 331 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 GDF1P27539 372 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 AGFG1P52594 562 aaKnown RBP8.76□□□□□ -1.01
RFFL-203ENST00000413582 PLA2G16P53816 162 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 IL2P60568 153 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 TBL3Q12788 808 aaKnown RBP8.76□□□□□ -1.01
RFFL-203ENST00000413582 STX4Q12846 297 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 DUSP8Q13202 625 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 SERTAD2Q14140 314 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 SLBPQ14493 270 aaKnown RBP eCLIP8.76□□□□□ -1.01
RFFL-203ENST00000413582 EFTUD2Q15029 972 aaKnown RBP eCLIP8.76□□□□□ -1.01
RFFL-203ENST00000413582 TRMT10BQ6PF06 316 aaKnown RBP8.76□□□□□ -1.01
RFFL-203ENST00000413582 CAPN12Q6ZSI9 719 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 VN1R5Q7Z5H4 357 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 CNTN4Q8IWV2 1026 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 RIBC1Q8N443 379 aaPredicted RBP8.76□□□□□ -1.01
RFFL-203ENST00000413582 GPATCH11Q8N954 259 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 TTLQ8NG68 377 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 OR2L5Q8NG80 312 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 OR10G3Q8NGC4 313 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 MBD3L2Q8NHZ7 208 aaPredicted RBP8.76□□□□□ -1.01
RFFL-203ENST00000413582 SLC22A8Q8TCC7 542 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 CCT6BQ92526 530 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 CDKL2Q92772 493 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 CERS2Q96G23 380 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 DACH2Q96NX9 599 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 ZIM3Q96PE6 472 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 SERINC2Q96SA4 455 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 TIMP4Q99727 224 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 BDH2Q9BUT1 245 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 TRIM54Q9BYV2 358 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 ACSS3Q9H6R3 686 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 IARS2Q9NSE4 1012 aaKnown RBP8.76□□□□□ -1.01
RFFL-203ENST00000413582 NSMCE4AQ9NXX6 385 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 GALNT8Q9NY28 637 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 SLC17A6Q9P2U8 582 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 COPS7AQ9UBW8 275 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 TRPS1Q9UHF7 1281 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 CNOT11Q9UKZ1 510 aaKnown RBP8.76□□□□□ -1.01
RFFL-203ENST00000413582 SLC22A14Q9Y267 594 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 KCNE2Q9Y6J6 123 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 ABCA1O95477 2261 aa8.76□□□□□ -1.01
RFFL-203ENST00000413582 HEATR5AQ86XA9 2040 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 TCRBV9S1A1TA0A576 114 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 SH3D21A4FU49 640 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 FAM159BA6NKW6 160 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 LDB3O75112 727 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 TRIM3O75382 744 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms