RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ARPC1BO15143 372 aaKnown RBP4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 LANCL1O43813 399 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 TOM1L1O75674 476 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 DUS4LO95620 317 aaKnown RBP4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 FHP07954 510 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 HSPA5P11021 654 aaKnown RBP4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 IL4RP24394 825 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 PTPN4P29074 926 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 PPP2R1AP30153 589 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 RPL9P32969 192 aaKnown RBP4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 TRA2BP62995 288 aaKnown RBP4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 PMP22Q01453 160 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 RIGQ13278 110 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 TMEM187Q14656 261 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 SLC17A1Q14916 467 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 MTHFSDQ2M296 383 aaKnown RBP4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 BSPRYQ5W0U4 402 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 ARHGAP11AQ6P4F7 1023 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 LCLAT1Q6UWP7 414 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 CUZD1Q86UP6 607 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 NUP37Q8NFH4 326 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 OR6F1Q8NGZ6 308 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 OR2T6Q8NHC8 308 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 FAM76AQ8TAV0 307 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 SLCO2A1Q92959 643 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 NCLNQ969V3 563 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 VPS39Q96JC1 886 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 ALKBH3Q96Q83 286 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 FAM124BQ9H5Z6 455 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 DCTPP1Q9H773 170 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 FGF22Q9HCT0 170 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 IL1RAPQ9NPH3 570 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 AATFQ9NY61 560 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 ATXN10Q9UBB4 475 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF580Q9UK33 172 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 KLHDC2Q9Y2U9 406 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 MRPS18CQ9Y3D5 142 aaKnown RBP4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 WIPI2Q9Y4P8 454 aa4.06□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 K7EQD1 137 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 CHADO15335 359 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 CFLARO15519 480 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 CLDN3O15551 220 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 DUSP11O75319 330 aaKnown RBP4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 APBB3O95704 486 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 FCER2P06734 321 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 KRT13P13646 458 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 GP9P14770 177 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 SELEP16581 610 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF26P17031 533 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 EDNRAP25101 427 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 TRIM23P36406 574 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 MATKP42679 507 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 RAG2P55895 527 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ERVK-16P61578 105 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 RPS27AP62979 156 aaKnown RBP4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 CYCSP99999 105 aaKnown RBP4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ELP6Q0PNE2 266 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 FUT7Q11130 342 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 OVGP1Q12889 678 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF177Q13360 481 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 KIAA0141Q14154 515 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZKSCAN8Q15776 578 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ECSCRQ19T08 205 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ADPRMQ3LIE5 342 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ANKDD1AQ495B1 522 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 USH1GQ495M9 461 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZFP69Q49AA0 526 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 SULT1C3Q6IMI6 304 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 SLC25A24Q6NUK1 477 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ABRAXAS1Q6UWZ7 409 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 KIF6Q6ZMV9 814 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 DPY19L2P2Q6ZN68 376 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 FRRS1Q6ZNA5 592 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ARMCX2Q7L311 632 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 PYROXD2Q8N2H3 581 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 GVQW1Q8N7I0 195 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 IPMKQ8NFU5 416 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 OR10G7Q8NGN6 311 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 CHPT1Q8WUD6 406 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 THRSPQ92748 146 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 MCHR2Q969V1 340 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 DTNBP1Q96EV8 351 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ATXN7L3BQ96GX2 97 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ANKRD27Q96NW4 1050 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 TNFRSF13CQ96RJ3 184 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 OVOL2Q9BRP0 275 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 NDUFAF3Q9BU61 184 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 FICDQ9BVA6 458 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF416Q9BWM5 594 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF696Q9H7X3 374 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 NMUR1Q9HB89 426 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 CENPMQ9NSP4 180 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 GDAP2Q9NXN4 497 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 P2RX2Q9UBL9 471 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 CHMP2BQ9UQN3 213 aa4.05□□□□□ -1.76
HMGB3P31-201ENST00000413333 PTPRUQ92729 1446 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 A0A087X002 238 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 A0A0U1RQV5 110 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 G3V2L1 256 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms