RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 PCDHGA11Q9Y5H2 935 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 CHCHD2Q9Y6H1 151 aaPredicted RBP17.7■□□□□ 0.42
CPSF7-204ENST00000413232 A0A087X1B8 175 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 A0A096LPK6 155 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 LRRC3CA6NJW4 275 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 SYCE1LA8MT33 242 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 BCKDKO14874 412 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 SUSD5O60279 629 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 KLHL2O95198 593 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 GPR75O95800 540 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 GFAPP14136 432 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 PTX3P26022 381 aaPredicted RBP17.69■□□□□ 0.42
CPSF7-204ENST00000413232 CASQ1P31415 396 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 MAN2A2P49641 1150 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 SLC37A1P57057 533 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 GTF2H2Q13888 395 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 ACAP2Q15057 778 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 PCBP2Q15366 365 aaKnown RBP eCLIP17.69■□□□□ 0.421e-6■■■■□ 24.4
CPSF7-204ENST00000413232 FAM219BQ5XKK7 198 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 GTF2H2CQ6P1K8 395 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 SYT10Q6XYQ8 523 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 TMEM64Q6YI46 380 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 OR10Q1Q8NGQ4 319 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 CDK15Q96Q40 435 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 GAL3ST4Q96RP7 486 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 IPPKQ9H8X2 491 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 ACAD8Q9UKU7 415 aa17.69■□□□□ 0.42
CPSF7-204ENST00000413232 SETD2Q9BYW2 2564 aaPredicted RBP17.69■□□□□ 0.42
CPSF7-204ENST00000413232 OR7A17O14581 309 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 PGRMC2O15173 223 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 AIFM1O95831 613 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 HOXD4P09016 255 aaPredicted RBP17.68■□□□□ 0.42
CPSF7-204ENST00000413232 FBXO45P0C2W1 286 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 FAM58BPP0C7Q3 252 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 PRRC2AP48634 2157 aaKnown RBP17.68■□□□□ 0.42
CPSF7-204ENST00000413232 DLX5P56178 289 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 ETF1P62495 437 aaKnown RBP17.68■□□□□ 0.42
CPSF7-204ENST00000413232 EBPQ15125 230 aaKnown RBP17.68■□□□□ 0.42
CPSF7-204ENST00000413232 FAM83EQ2M2I3 478 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 SPRED3Q2MJR0 410 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 B3GNT6Q6ZMB0 384 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 ZNF572Q7Z3I7 529 aaPredicted RBP17.68■□□□□ 0.42
CPSF7-204ENST00000413232 L3MBTL4Q8NA19 623 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 SLC22A8Q8TCC7 542 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 WWTR1Q9GZV5 400 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 LDAHQ9H6V9 325 aa17.68■□□□□ 0.42
CPSF7-204ENST00000413232 ZNF703Q9H7S9 590 aaPredicted RBP17.68■□□□□ 0.42
CPSF7-204ENST00000413232 CPSF2Q9P2I0 782 aaKnown RBP17.68■□□□□ 0.42
CPSF7-204ENST00000413232 CNOT11Q9UKZ1 510 aaKnown RBP17.68■□□□□ 0.42
CPSF7-204ENST00000413232 MTORP42345 2549 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 TRGV5A0A0B4J1U4 118 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 IQANK1A0A1B0GTG1 560 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 FIGNL2A6NMB9 653 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 UGDHO60701 494 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 CT62P0C5K7 136 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 NR2F6P10588 404 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 TLX1P31314 330 aaPredicted RBP17.67■□□□□ 0.42
CPSF7-204ENST00000413232 SSTR4P31391 388 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 BUD31P41223 144 aaPredicted RBP17.67■□□□□ 0.42
CPSF7-204ENST00000413232 ARFIP1P53367 373 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 BIKQ13323 160 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 CUL3Q13618 768 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 UAP1Q16222 522 aaPredicted RBP17.67■□□□□ 0.42
CPSF7-204ENST00000413232 TECRLQ5HYJ1 363 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 RNF111Q6ZNA4 994 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 FBXW8Q8N3Y1 598 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 SLC15A4Q8N697 577 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 FAM13CQ8NE31 585 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 OR52B6Q8NGF0 335 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 RIT1Q92963 219 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 ART5Q96L15 291 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 CENPKQ9BS16 269 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 LRRC1Q9BTT6 524 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 SLC6A15Q9H2J7 730 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 NOL11Q9H8H0 719 aaKnown RBP17.67■□□□□ 0.42
CPSF7-204ENST00000413232 ZFP64Q9NPA5 681 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 TEX10Q9NXF1 929 aaPredicted RBP17.67■□□□□ 0.42
CPSF7-204ENST00000413232 ALKBH4Q9NXW9 302 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.67■□□□□ 0.42
CPSF7-204ENST00000413232 ZFHX3Q15911 3703 aa17.67■□□□□ 0.42
CPSF7-204ENST00000413232 DOCK7Q96N67 2140 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 KDM4EB2RXH2 506 aaPredicted RBP17.66■□□□□ 0.42
CPSF7-204ENST00000413232 OR10H2O60403 315 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 TYK2P29597 1187 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 ZFP36L2P47974 494 aaKnown RBP17.66■□□□□ 0.42
CPSF7-204ENST00000413232 KCNJ2P63252 427 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 SNTB1Q13884 538 aaKnown RBP17.66■□□□□ 0.42
CPSF7-204ENST00000413232 NTRK2Q16620 822 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 BICRALQ6AI39 1079 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 CYP20A1Q6UW02 462 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 SEM1Q6ZVN7 128 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 SLC29A4Q7RTT9 530 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 CCDC91Q7Z6B0 441 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 LRRC25Q8N386 305 aaPredicted RBP17.66■□□□□ 0.42
CPSF7-204ENST00000413232 ZNF441Q8N8Z8 693 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 C7orf57Q8NEG2 295 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 NRGNQ92686 78 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 SARAFQ96BY9 339 aa17.66■□□□□ 0.42
CPSF7-204ENST00000413232 NSUN5Q96P11 429 aaKnown RBP17.66■□□□□ 0.42
CPSF7-204ENST00000413232 VPS11Q9H270 941 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms