RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SLC35G6P0C7Q6 338 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 NR2F1P10589 423 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF708P17019 499 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SRD5A1P18405 259 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 GNAZP19086 355 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 UGT1A1P22309 533 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 UCP1P25874 307 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 KLRC2P26717 231 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 DPP4P27487 766 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 NMBRP28336 390 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 RPL3P39023 403 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 HADHAP40939 763 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 DPP6P42658 865 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SYKP43405 635 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 UBE2E1P51965 193 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 APOC4P55056 127 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 RPS29P62273 56 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 IRX4P78413 519 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 TXNL4AP83876 142 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 IL5RAQ01344 420 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 CDC20Q12834 499 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 CYLC2Q14093 348 aaPredicted RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 HAGHQ16775 308 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 LONRF1Q17RB8 773 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMEM44Q2T9K0 475 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 ASTE1Q2TB18 679 aaPredicted RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPRNQ5BIV9 151 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 YIF1BQ5BJH7 314 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 GPRC6AQ5T6X5 926 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAM222AQ5U5X8 452 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 GLYATQ6IB77 296 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 DHRS13Q6UX07 377 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 CHST15Q7LFX5 561 aaPredicted RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC16A9Q7RTY1 509 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 TRPM8Q7Z2W7 1104 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 PATL1Q86TB9 770 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPATS2Q86XZ4 545 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 DZIP1Q86YF9 867 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 C2CD5Q86YS7 1000 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 LACC1Q8IV20 430 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 CCDC117Q8IWD4 279 aaPredicted RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 TCAIMQ8N3R3 496 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SVOPLQ8N434 492 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 DHRSXQ8N5I4 330 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 HORMAD2Q8N7B1 307 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 IGSF22Q8N9C0 903 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR52M1Q8NGK5 317 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR13F1Q8NGS4 319 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR4A5Q8NH83 315 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPACA4Q8TDM5 124 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 BRIX1Q8TDN6 353 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 TRAF3IP1Q8TDR0 691 aaPredicted RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 PIGBQ92521 554 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 JADE3Q92613 823 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAM120BQ96EK7 910 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SGK494Q96LW2 274 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPATA13Q96N96 652 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF558Q96NG5 402 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 CMKLR1Q99788 373 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 CHCHD6Q9BRQ6 235 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 TIMM29Q9BSF4 260 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 DCSTAMPQ9H295 470 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 LRRN3Q9H3W5 708 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAM124BQ9H5Z6 455 aaPredicted RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 EPHX3Q9H6B9 360 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF702PQ9H963 129 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 TRIM39Q9HCM9 518 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 RPRD1BQ9NQG5 326 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 DDX21Q9NR30 783 aaKnown RBP eCLIP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 NANSQ9NR45 359 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 OLFML3Q9NRN5 406 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC6A13Q9NSD5 602 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 ABHD10Q9NUJ1 306 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 INTS9Q9NV88 658 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 C5AR2Q9P296 337 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC9A2Q9UBY0 812 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 FEM1BQ9UK73 627 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMEM5Q9Y2B1 443 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 AMDHD2Q9Y303 409 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 TRIM17Q9Y577 477 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 PSAT1Q9Y617 370 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 PDS5AQ29RF7 1337 aaKnown RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 MAP3K15Q6ZN16 1313 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CEP250Q9BV73 2442 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CEP192Q8TEP8 1941 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPATA31E1Q6ZUB1 1445 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 A0A1B0GVI7 797 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR2T8A6NH00 312 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 MSGN1A6NI15 193 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 NPIPB13A6NJU9 1138 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 A8MXQ7 604 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 F5H6K3 240 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 G3V3Q6 166 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 PDHXO00330 501 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CCL21O00585 134 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 APAF1O14727 1248 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 PSMA7O14818 248 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 AREL1O15033 823 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SURF4O15260 269 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 RBFOX2O43251 390 aaKnown RBP eCLIP-1.89□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms