RNA–Protein interactions for RNA: ENST00000409937.1

CNGA3-204, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CNGA3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-204ENST00000409937 TDP1Q9NUW8 608 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 CNOT2Q9NZN8 540 aaKnown RBP13.35□□□□□ -0.27
CNGA3-204ENST00000409937 TRPC4Q9UBN4 977 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 KCND3Q9UK17 655 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 MKLN1Q9UL63 735 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 A0A1W2PS29 197 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 H7BY64 318 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 H1F0P07305 194 aaKnown RBP13.35□□□□□ -0.27
CNGA3-204ENST00000409937 ITGB8P26012 769 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 CSTF2P33240 577 aaKnown RBP eCLIP13.35□□□□□ -0.27
CNGA3-204ENST00000409937 HOXC5Q00444 222 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 FAM214AQ32MH5 1076 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 ATAT1Q5SQI0 421 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 ARMC4Q5T2S8 1044 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 KLHDC8AQ8IYD2 350 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 OR6F1Q8NGZ6 308 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 C9orf43Q8TAL5 461 aaPredicted RBP13.35□□□□□ -0.27
CNGA3-204ENST00000409937 TM4SF18Q96CE8 201 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 DTD2Q96FN9 168 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 PDXPQ96GD0 296 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 TMEM80Q96HE8 168 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 PRAP1Q96NZ9 151 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 PRRG3Q9BZD7 231 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 ZBP1Q9H171 429 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 SLC23A2Q9UGH3 650 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 NOX1Q9Y5S8 564 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 HEATR5BQ9P2D3 2071 aa13.35□□□□□ -0.27
CNGA3-204ENST00000409937 SCAMP1O15126 338 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 PDPK1O15530 556 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 LATO43561 262 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 IDH3BO43837 385 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 KRT8P05787 483 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 HTR3AP46098 478 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 E2F2Q14209 437 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 PLPP4Q5VZY2 271 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 ACSM5Q6NUN0 579 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 PODNL1Q6PEZ8 512 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 TMPRSS11AQ6ZMR5 421 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 IQCHQ86VS3 1027 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 CAMKK1Q8N5S9 505 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 TP53INP1Q96A56 240 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 ARRDC3Q96B67 414 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 ZFYVE19Q96K21 471 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 LRRC3BQ96PB8 259 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 TM9SF2Q99805 663 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 PLA2G12AQ9BZM1 189 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 EGLN3Q9H6Z9 239 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 SIRT3Q9NTG7 399 aaPredicted RBP13.34□□□□□ -0.27
CNGA3-204ENST00000409937 SEC14L3Q9UDX4 400 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 ZNF221Q9UK13 617 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 CHD9Q3L8U1 2897 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 SH3D21A4FU49 640 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 SEMA3DO95025 777 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 TP53P04637 393 aaPredicted RBP13.34□□□□□ -0.27
CNGA3-204ENST00000409937 IL7P13232 177 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 LAG3P18627 525 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 NNMTP40261 264 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 MLLT1Q03111 559 aaPredicted RBP13.34□□□□□ -0.27
CNGA3-204ENST00000409937 SAXO2Q658L1 398 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 ZNF517Q6ZMY9 492 aaPredicted RBP13.34□□□□□ -0.27
CNGA3-204ENST00000409937 PHC2Q8IXK0 858 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 UBQLNLQ8IYU4 475 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 PIK3R3Q92569 461 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 KLK6Q92876 244 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 EFHD2Q96C19 240 aaPredicted RBP13.34□□□□□ -0.27
CNGA3-204ENST00000409937 RACGAP1Q9H0H5 632 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 LHX9Q9NQ69 397 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 SPATA7Q9P0W8 599 aa13.34□□□□□ -0.27
CNGA3-204ENST00000409937 SZT2Q5T011 3432 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 QSOX1O00391 747 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 MYL12BO14950 172 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 ADAP00813 363 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 C6P13671 934 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 HOXB3P14651 431 aaPredicted RBP13.33□□□□□ -0.28
CNGA3-204ENST00000409937 PCSK2P16519 638 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 ZNF24P17028 368 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 ERVFC1P60507 584 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 RPS25P62851 125 aaKnown RBP13.33□□□□□ -0.28
CNGA3-204ENST00000409937 INSL4Q14641 139 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 TIMM50Q3ZCQ8 353 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 SLX4IPQ5VYV7 408 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 CNKSR3Q6P9H4 555 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 FAM131AQ6UXB0 335 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 USP30Q70CQ3 517 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 NUS1Q96E22 293 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 NEURL3Q96EH8 262 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 WDR34Q96EX3 536 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 LRR1Q96L50 414 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 TREX2Q9BQ50 279 aaPredicted RBP13.33□□□□□ -0.28
CNGA3-204ENST00000409937 FAM83CQ9BQN1 747 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 DYRK4Q9NR20 520 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 TBC1D14Q9P2M4 693 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 MAPRE3Q9UPY8 281 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 SPIN1Q9Y657 262 aaPredicted RBP13.33□□□□□ -0.28
CNGA3-204ENST00000409937 CAPN5O15484 640 aaPredicted RBP13.33□□□□□ -0.28
CNGA3-204ENST00000409937 LZTS3O60299 673 aaPredicted RBP13.33□□□□□ -0.28
CNGA3-204ENST00000409937 CSF2RAP15509 400 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 DDCP20711 480 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 MMP11P24347 488 aa13.33□□□□□ -0.28
CNGA3-204ENST00000409937 SOX18P35713 384 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms