RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 BICRALQ6AI39 1079 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 TRIM40Q6P9F5 258 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 LMNTD2Q8IXW0 634 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 ZNF441Q8N8Z8 693 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 GPATCH11Q8N954 259 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 SPATA4Q8NEY3 305 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 ZPLD1Q8TCW7 415 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 ATL1Q8WXF7 558 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 DIO2Q92813 273 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 ABTB1Q969K4 478 aaPredicted RBP11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 INTS12Q96CB8 462 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 ZFP3Q96NJ6 502 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 TUBA1CQ9BQE3 449 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 RHOXF2Q9BQY4 288 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 FUT8Q9BYC5 575 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 TAS2R13Q9NYV9 303 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 SLC22A14Q9Y267 594 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 C15orf41Q9Y2V0 281 aa11.72□□□□□ -0.53
CHRNA1-203ENST00000409219 A0A087X1B8 175 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 ANKRD33BA6NCL7 494 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 SNPHO15079 494 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 RCBTB2O95199 551 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 SERPINB3P29508 390 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 NAGLUP54802 743 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 VSNL1P62760 191 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 FAM27E3Q08E93 113 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 RCN2Q14257 317 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 GLE1Q53GS7 698 aaKnown RBP11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 WIPI1Q5MNZ9 446 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 TBCELQ5QJ74 424 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 RBM20Q5T481 1227 aaKnown RBP11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 C10orf62Q5T681 223 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 ABHD17CQ6PCB6 329 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 C4orf22Q6V702 233 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 VN1R5Q7Z5H4 357 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 ADGRE4PQ86SQ3 457 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 CAND1Q86VP6 1230 aaKnown RBP11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 TTLQ8NG68 377 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 ANKRD9Q96BM1 317 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 SENP5Q96HI0 755 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 PBKQ96KB5 322 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 RILPQ96NA2 401 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 GNRHR2Q96P88 292 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 GAL3ST4Q96RP7 486 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 REXO4Q9GZR2 422 aaKnown RBP11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 PIGMQ9H3S5 423 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 COPS7BQ9H9Q2 264 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 C20orf96Q9NUD7 363 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 ZNF226Q9NYT6 803 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 PACSIN3Q9UKS6 424 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 MAD1L1Q9Y6D9 718 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 KCNE2Q9Y6J6 123 aa11.71□□□□□ -0.53
CHRNA1-203ENST00000409219 RNF223E7ERA6 249 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 WIPF1O43516 503 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 SEC31AO94979 1220 aaKnown RBP11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 ENO2P09104 434 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 CYP4B1P13584 511 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 COX7A2P14406 83 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 MSH2P43246 934 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 PGGT1BP53609 377 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 DIO3P55073 304 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 SLBPQ14493 270 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 PPP1R3AQ16821 1122 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 ADNP2Q6IQ32 1131 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 TMIGD1Q6UXZ0 262 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 DGAT2L6Q6ZPD8 337 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 PLEKHM3Q6ZWE6 761 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 CALML6Q8TD86 181 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 TM9SF2Q99805 663 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 MAPKAP1Q9BPZ7 522 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 MED18Q9BUE0 208 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 G6PC3Q9BUM1 346 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 TRIM54Q9BYV2 358 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 ZNF701Q9NV72 531 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 CLCF1Q9UBD9 225 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 IKZF3Q9UKT9 509 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 SVEP1Q4LDE5 3571 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 HAX1O00165 279 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 TLX2O43763 284 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 FGF17O60258 216 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 CLEC3AO75596 197 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 TNFSF13O75888 250 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 SASH3O75995 380 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 GSTM2P28161 218 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 CXCR5P32302 372 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 RPL21P46778 160 aaKnown RBP11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 STT3AP46977 705 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 MASP1P48740 699 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 ATP5J2P56134 94 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 IGLV3-21P80748 117 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 C2orf54Q08AI8 447 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 RPS6KA2Q15349 733 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 TOMM20Q15388 145 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 KRTAP24-1Q3LI83 254 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 HSP90AA5PQ58FG0 334 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 ANKRD22Q5VYY1 191 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 DRICH1Q6PGQ1 229 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 SBSNQ6UWP8 590 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 ZNF793Q6ZN11 406 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms