RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ADORA3P0DMS8 318 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 PVRP15151 417 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 PRLHRP49683 370 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 GPLD1P80108 840 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 BDH1Q02338 343 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 MOGSQ13724 837 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 FAM189A2Q15884 450 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 DEFB109BQ30KR1 87 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 B3GNT9Q6UX72 402 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM139Q8IV31 216 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF101Q8IZC7 436 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 OR2L8Q8NGY9 312 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 OR8S1Q8NH09 359 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 C16orf78Q8WTQ4 265 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 LRRC58Q96CX6 371 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 NMD3Q96D46 503 aaKnown RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 MUCL1Q96DR8 90 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 CENPNQ96H22 339 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF184Q99676 751 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 COQ3Q9NZJ6 369 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 DAPK2Q9UIK4 370 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 GNG8Q9UK08 70 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 RIMKLBQ9ULI2 386 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 HS3ST2Q9Y278 367 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 R4GN57 208 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 PHIPQ8WWQ0 1821 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 LOC102723532A0A0G2JNH3 316 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ARGFXA6NJG6 315 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM233B4DJY2 109 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 M0QX08 132 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 RTCAO00442 366 aaKnown RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ANKRD28O15084 1053 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 PROM1O43490 865 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ITM2AO43736 263 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 MMP2P08253 660 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 HTR1AP08908 422 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 CD79AP11912 226 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF43P17038 809 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 CPOXP36551 454 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 RAB2AP61019 212 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 LSM3P62310 102 aaKnown RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 MZT1Q08AG7 82 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 RAB11FIP2Q7L804 512 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 MAMDC2Q7Z304 686 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 GRAMD2AQ8IUY3 354 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 IQCF2Q8IXL9 164 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 PARP8Q8N3A8 854 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 MFSD9Q8NBP5 474 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 OR51Q1Q8NH59 317 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 OSTF1Q92882 214 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 PGAM5Q96HS1 289 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 HSH2DQ96JZ2 352 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM121BQ9BXQ6 578 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ACTRT3Q9BYD9 372 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 FN3KQ9H479 309 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 KCMF1Q9P0J7 381 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 TNFRSF10DQ9UBN6 386 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 KLHL21Q9UJP4 597 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 BAZ2AQ9UIF9 1905 aaKnown RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 LOC110117498-PIK3R3F6TDL0 507 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 FLRT2O43155 660 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SCGB2A1O75556 95 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 HRGP04196 525 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 IL9P15248 144 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 DDCP20711 480 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 MSX1P28360 303 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ACSL1P33121 698 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SFTPDP35247 375 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 MAGEA8P43361 318 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SEC23BQ15437 767 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 IQCCQ4KMZ1 466 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 MINDY1Q8N5J2 469 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 PIK3R3Q92569 461 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SGTBQ96EQ0 304 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 HSPBAP1Q96EW2 488 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 GINS4Q9BRT9 223 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 EMC9Q9Y3B6 208 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 C4orf47A7E2U8 309 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 RLN1P04808 185 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 PEPDP12955 493 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 ZNF35P13682 527 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 MAGP20916 626 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 TTKP33981 857 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 ADPRHP54922 357 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 GPX6P59796 221 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 COL9A2Q14055 689 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-203ENST00000409101 OCLNQ16625 522 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 MSS51Q4VC12 460 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 SWT1Q5T5J6 900 aaKnown RBP4.77□□□□□ -1.65
SCN3A-203ENST00000409101 NDUFAF5Q5TEU4 345 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 LANCL3Q6ZV70 420 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 CENPSQ8N2Z9 138 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 OR6N2Q8NGY6 317 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 NSMAFQ92636 917 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 MS4A4EQ96PG1 132 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 DCUN1D5Q9BTE7 237 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 CHID1Q9BWS9 393 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 CST11Q9H112 138 aa4.77□□□□□ -1.65
SCN3A-203ENST00000409101 LRRN3Q9H3W5 708 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms